RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 NCF1P14598 390 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 ABOP16442 354 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 HSPA7P48741 367 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 PLA2G16P53816 162 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 IRF8Q02556 426 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 SERTAD2Q14140 314 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 DOC2AQ14183 400 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 C18orf21Q32NC0 220 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 RGS9BPQ6ZS82 235 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 CHSY3Q70JA7 882 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 SULF2Q8IWU5 870 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 SNX31Q8N9S9 440 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 ZFP62Q8NB50 900 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 MORN4Q8NDC4 146 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 OR8K3Q8NH51 312 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 NCLNQ969V3 563 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 VKORC1Q9BQB6 163 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 TMEM79Q9BSE2 394 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 RAB17Q9H0T7 212 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 COPS7BQ9H9Q2 264 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 CAB39LQ9H9S4 337 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 PRDM7Q9NQW5 492 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 PNO1Q9NRX1 252 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 FBXW2Q9UKT8 454 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 RNF112Q9ULX5 631 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 CLCA3PQ9Y6N3 262 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 ABCA12Q86UK0 2595 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 LRBAP50851 2863 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 PHGDHO43175 533 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 RAD51CO43502 376 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 PEX1O43933 1283 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 ITGA10O75578 1167 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 WISP2O76076 250 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 CLDN14O95500 239 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 TBX6O95947 436 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 STX2P32856 288 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 SSR4P51571 173 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 ARFIP1P53367 373 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 ADORA2A-AS1P86434 159 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 STX4Q12846 297 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 BMPR2Q13873 1038 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 OR4D1Q15615 310 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 PAOXQ6QHF9 649 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 HSDL2Q6YN16 418 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 CAPN12Q6ZSI9 719 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 VN1R5Q7Z5H4 357 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 TBC1D1Q86TI0 1168 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 ISCA2Q86U28 154 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 DOLPP1Q86YN1 238 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 MCEMP1Q8IX19 187 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 CTAGE3PQ8IX95 158 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 CYP4Z2PQ8N1L4 340 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 SPATA6LQ8N4H0 392 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 CPSF7Q8N684 471 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 OR5L2Q8NGL0 311 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 OR14A16Q8NHC5 309 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 ALOXE3Q9BYJ1 711 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 UNKQ9C0B0 810 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 DPH5Q9H2P9 285 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 GRHL1Q9NZI5 618 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 NUDT4Q9NZJ9 180 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 KCMF1Q9P0J7 381 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 MYOTQ9UBF9 498 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 SH3BGRL2Q9UJC5 107 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 TSC22D4Q9Y3Q8 395 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 CLDN16Q9Y5I7 305 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 PKDREJQ9NTG1 2253 aa11.35□□□□□ -0.59
GTF3C1-204ENST00000564664 SYCE1LA8MT33 242 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 A8MVJ9 347 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 TFECO14948 347 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 CCNT2O60583 730 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 PRAMEF4O60810 478 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 KERAO60938 352 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 SCELO95171 688 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 C1QAP02745 245 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 TUBB4AP04350 444 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 IFNA16P05015 189 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 LTA4HP09960 611 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 PRF1P14222 555 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 COX6B1P14854 86 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 ATP5A1P25705 553 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 CASQ1P31415 396 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 PTGS2P35354 604 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 MAGEA4P43358 317 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 MEOX1P50221 254 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 PLTPP55058 493 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 GPX6P59796 221 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 CHIT1Q13231 466 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 AP5B1Q2VPB7 878 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 RNFT1Q5M7Z0 435 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 PRAMEF9Q5VWM5 478 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 TMEM211Q6ICI0 200 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 METTL2BQ6P1Q9 378 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 MED27Q6P2C8 311 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 RAPH1Q70E73 1250 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 GDF7Q7Z4P5 450 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 SRRM1Q8IYB3 904 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms