RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 FAM114A1Q8IWE2 563 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 TTC30BQ8N4P2 665 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 TC2NQ8N9U0 490 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 OR6S1Q8NH40 331 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 OR52N5Q8NH56 324 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 SMAP2Q8WU79 429 aaPredicted RBP3.51□□□□□ -1.85
CHD9-212ENST00000564641 SPDL1Q96EA4 605 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 ZBED3Q96IU2 234 aaPredicted RBP3.51□□□□□ -1.85
CHD9-212ENST00000564641 CCDC114Q96M63 670 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 JAKMIP1Q96N16 626 aaKnown RBP3.51□□□□□ -1.85
CHD9-212ENST00000564641 TSPAN18Q96SJ8 248 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 CCDC106Q9BWC9 280 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 LRRCC1Q9C099 1032 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 FAM49AQ9H0Q0 323 aaPredicted RBP3.51□□□□□ -1.85
CHD9-212ENST00000564641 S1PR5Q9H228 398 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 DCTPP1Q9H773 170 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 XAB2Q9HCS7 855 aaKnown RBP3.51□□□□□ -1.85
CHD9-212ENST00000564641 PFDN4Q9NQP4 134 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 SPHK2Q9NRA0 654 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 MRGBPQ9NV56 204 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 PANK4Q9NVE7 773 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 ANO10Q9NW15 660 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 LARSQ9P2J5 1176 aaKnown RBP3.51□□□□□ -1.85
CHD9-212ENST00000564641 ANAPC5Q9UJX4 755 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 TRIOBPQ9H2D6 2365 aa3.51□□□□□ -1.85
CHD9-212ENST00000564641 MYH13Q9UKX3 1938 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 ARAP2Q8WZ64 1704 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 VPS37CA5D8V6 355 aaPredicted RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 ENO4A6NNW6 628 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 TCP10L2B9ZVM9 353 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 GOLGA8KD6RF30 607 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 PSMA7O14818 248 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 SLC7A4O43246 635 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 CDK2AP2O75956 126 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 WDPCPO95876 746 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 RPSAP08865 295 aaKnown RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 PRKACGP22612 351 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 CHMLP26374 656 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 GJB2P29033 226 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 RAB28P51157 221 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 SUOXP51687 545 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 CSE1LP55060 971 aaKnown RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 GSTO1P78417 241 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 VGLL4Q14135 290 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 CASP8Q14790 479 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 HYAL4Q2M3T9 481 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 ITPRIPL2Q3MIP1 535 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 CCDC40Q4G0X9 1142 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 CBWD6Q4V339 395 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 LRRC23Q53EV4 343 aaPredicted RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 CBWD3Q5JTY5 395 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 PET117Q6UWS5 81 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 RBM43Q6ZSC3 357 aaKnown RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 MOB2Q70IA6 237 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 HAUS6Q7Z4H7 955 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 ADIPOR2Q86V24 386 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 DZIP1Q86YF9 867 aaKnown RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 TMEM139Q8IV31 216 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 Q8NFD4 153 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 GPRC5AQ8NFJ5 357 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 OR6J1Q8NGC5 347 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 OR13C3Q8NGS6 347 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 GOT1L1Q8NHS2 421 aaPredicted RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 VANGL1Q8TAA9 524 aaPredicted RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 CD99L2Q8TCZ2 262 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 FAM151AQ8WW52 585 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 LPGAT1Q92604 370 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 ZNF414Q96IQ9 312 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 FER1L6-AS2Q96M78 137 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 NAA11Q9BSU3 229 aaPredicted RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 FNDC11Q9BVV2 318 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 CAPS2Q9BXY5 557 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 GPR88Q9GZN0 384 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 IQCGQ9H095 443 aaKnown RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 SPATC1LQ9H0A9 340 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 ANKZF1Q9H8Y5 726 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 MED20Q9H944 212 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 VIPAS39Q9H9C1 493 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 SLC40A1Q9NP59 571 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 PIH1D3Q9NQM4 214 aaKnown RBP3.5□□□□□ -1.85
CHD9-212ENST00000564641 P4HTMQ9NXG6 502 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 NDE1Q9NXR1 346 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 ANGPTL3Q9Y5C1 460 aa3.5□□□□□ -1.85
CHD9-212ENST00000564641 ZNF646O15015 1829 aaPredicted RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 MKI67P46013 3256 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 BICDL2A1A5D9 508 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 ERICH2A1L162 156 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 HEPACAM2A8MVW5 462 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 BCL2L11O43521 198 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 XRCC3O43542 346 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 SHOX2O60902 331 aaPredicted RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 CIAO1O76071 339 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 BAG3O95817 575 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 UBTFL1P0CB47 393 aaPredicted RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 FERP16591 822 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 HLA-FP30511 346 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 PEX19P40855 299 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 TSFMP43897 325 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 SLC9A3P48764 834 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 GNGT1P63211 74 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms