RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TANKQ92844 425 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 RFKQ969G6 155 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 KIAA1143Q96AT1 154 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 PYCR2Q96C36 320 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 C11orf24Q96F05 449 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TMEM80Q96HE8 168 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 RPL10LQ96L21 214 aaKnown RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SIGLEC11Q96RL6 698 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 PKP4Q99569 1192 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SLC30A2Q9BRI3 323 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SGPP1Q9BX95 441 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 EBPLQ9BY08 206 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 CHST8Q9H2A9 424 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 ZNF106Q9H2Y7 1883 aaKnown RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TRIM39Q9HCM9 518 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DMRT3Q9NQL9 472 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SPHK2Q9NRA0 654 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 RASSF1Q9NS23 344 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SEMA3GQ9NS98 782 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 ACSS1Q9NUB1 689 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 GIMAP4Q9NUV9 329 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 EHD3Q9NZN3 535 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 NDUFAF4Q9P032 175 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 P2RX2Q9UBL9 471 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 RAB23Q9ULC3 237 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 BTBD3Q9Y2F9 522 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 VWA8A3KMH1 1905 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TRBC2A0A5B9 178 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 PIPSLA2A3N6 862 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TTC34A8MYJ7 566 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 C1QTNF3-AMACRE9PGA6 284 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 NEDD8-MDP1E9PL57 170 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TLR4O00206 839 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TOR1BO14657 336 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 CASC3O15234 703 aaKnown RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 CAPN5O15484 640 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 PCDHGA12O60330 932 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TRIM3O75382 744 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 UGT2B17O75795 530 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 SOX30O94993 753 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 C1orf105O95561 183 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 SCG5P05408 212 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 H1F0P07305 194 aaKnown RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 C8AP07357 584 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 POU2F2P09086 479 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 BMP4P12644 408 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 DDCP20711 480 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 LHCGRP22888 699 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 IMPA1P29218 277 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 NTSP30990 170 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 MAGEA10P43363 369 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TSFMP43897 325 aaKnown RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 MAP2K4P45985 399 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 GPR1P46091 355 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 XCR1P46094 333 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 GATMP50440 423 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 MANFP55145 182 aaKnown RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 RPS13P62277 151 aaKnown RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 YBX1P67809 324 aaKnown RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 CAP1Q01518 475 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 SCN1BQ07699 218 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 STARD3Q14849 445 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 AGERQ15109 404 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TAB1Q15750 504 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 OCLNQ16625 522 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 ANKDD1AQ495B1 522 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TMEM35AQ53FP2 167 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TMEM201Q5SNT2 666 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 PRAMEF14Q5SWL7 426 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 C1orf53Q5VUE5 145 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 PRAMEF13Q5VWM6 474 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 FAM46CQ5VWP2 391 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 FRMPD2BQ6IN97 320 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 FAM71E1Q6IPT2 247 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 MZT2AQ6P582 158 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 CD300LDQ6UXZ3 194 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 CEP68Q76N32 757 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 RRM2BQ7LG56 351 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 COMMD6Q7Z4G1 85 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TRMT11Q7Z4G4 463 aaKnown RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TECPR1Q7Z6L1 1165 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 VTCN1Q7Z7D3 282 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 KIAA0907Q7Z7F0 614 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TMEM150AQ86TG1 271 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 SLC22A16Q86VW1 577 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 NUDT13Q86X67 352 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 CMTM8Q8IZV2 173 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 NAGSQ8N159 534 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 SLC5A8Q8N695 610 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 KREMEN2Q8NCW0 462 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 PROKR2Q8NFJ6 384 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 OR2A12Q8NGT7 310 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 BBS10Q8TAM1 723 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 NDNFQ8TB73 568 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 CXorf40AQ8TE69 158 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 C16orf78Q8WTQ4 265 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 BCL7CQ8WUZ0 217 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 HPS1Q92902 700 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 NEURL3Q96EH8 262 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms