RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 OR5M9Q8NGP3 310 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 PRCCQ92733 491 aaPredicted RBP4□□□□□ -1.77
LINC00560-201ENST00000564593 ZNF560Q96MR9 790 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 FAM213AQ9BRX8 229 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 NTMT1Q9BV86 223 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 GPN1Q9HCN4 374 aaPredicted RBP4□□□□□ -1.77
LINC00560-201ENST00000564593 BARHL2Q9NY43 387 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 PLEK2Q9NYT0 353 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 TEX264Q9Y6I9 313 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 P2RX6O15547 441 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 STBD1O95210 358 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 DUS4LO95620 317 aaKnown RBP3.99□□□□□ -1.77
LINC00560-201ENST00000564593 CALCAP01258 141 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 EPOP01588 193 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 B4GALT1P15291 398 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 TYMPP19971 482 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 PDHA2P29803 388 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 OR1D2P34982 312 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 TNFSF10P50591 281 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 KCNK10P57789 538 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 GABPAQ06546 454 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 GK2Q14410 553 aaPredicted RBP3.99□□□□□ -1.77
LINC00560-201ENST00000564593 B3GLCTQ6Y288 498 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 KIF6Q6ZMV9 814 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 FRRS1Q6ZNA5 592 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 CYP4V2Q6ZWL3 525 aaPredicted RBP3.99□□□□□ -1.77
LINC00560-201ENST00000564593 NLRP14Q86W24 1093 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 STHQ8IWL8 128 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 SIDT2Q8NBJ9 832 aaKnown RBP3.99□□□□□ -1.77
LINC00560-201ENST00000564593 NEK11Q8NG66 645 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 GPR148Q8TDV2 347 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 UBTD2Q8WUN7 234 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 CNRIP1Q96F85 164 aaPredicted RBP3.99□□□□□ -1.77
LINC00560-201ENST00000564593 PRAM1Q96QH2 718 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 NAP1L3Q99457 506 aaPredicted RBP3.99□□□□□ -1.77
LINC00560-201ENST00000564593 FNDC4Q9H6D8 234 aaPredicted RBP3.99□□□□□ -1.77
LINC00560-201ENST00000564593 S100A14Q9HCY8 104 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 PRMT8Q9NR22 394 aaPredicted RBP3.99□□□□□ -1.77
LINC00560-201ENST00000564593 FETUBQ9UGM5 382 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 BAIAP2L1Q9UHR4 511 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 TEKT2Q9UIF3 430 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 SH3GLB1Q9Y371 365 aa3.99□□□□□ -1.77
LINC00560-201ENST00000564593 TIAM1Q13009 1591 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 THOC2Q8NI27 1593 aaKnown RBP3.98□□□□□ -1.77
LINC00560-201ENST00000564593 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 IQCMA0A1B0GVH7 501 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 ATP6AP2A0A1C7CYW4 349 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 SRRM4A7MD48 611 aaKnown RBP3.98□□□□□ -1.77
LINC00560-201ENST00000564593 TLX2O43763 284 aaPredicted RBP3.98□□□□□ -1.77
LINC00560-201ENST00000564593 ATP6V1G1O75348 118 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 BCAS2O75934 225 aaPredicted RBP3.98□□□□□ -1.77
LINC00560-201ENST00000564593 CPNE6O95741 557 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 ABHD2P08910 425 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 CYP3A5P20815 502 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 STIP1P31948 543 aaKnown RBP3.98□□□□□ -1.77
LINC00560-201ENST00000564593 BACE1P56817 501 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 EVCP57679 992 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 PMP22Q01453 160 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 STX1AQ16623 288 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 KIF26BQ2KJY2 2108 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 OTUD3Q5T2D3 398 aaPredicted RBP3.98□□□□□ -1.77
LINC00560-201ENST00000564593 GFI1BQ5VTD9 330 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 ADAM5Q6NVV9 412 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 OR9Q2Q8NGE9 314 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 OR4A16Q8NH70 328 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 ATP8B4Q8TF62 1192 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 SPATA13Q96N96 652 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 ERGIC2Q96RQ1 377 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 SSX3Q99909 188 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 OVOL2Q9BRP0 275 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 MARCH7Q9H992 704 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 FAM212BQ9NTI7 297 aaPredicted RBP3.98□□□□□ -1.77
LINC00560-201ENST00000564593 NLGN3Q9NZ94 848 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 KLK11Q9UBX7 282 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 WIPI2Q9Y4P8 454 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 OR1A2Q9Y585 309 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 ZHX2Q9Y6X8 837 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 UMODL1Q5DID0 1318 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 GPRASP1Q5JY77 1395 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 DHX29Q7Z478 1369 aaKnown RBP3.98□□□□□ -1.77
LINC00560-201ENST00000564593 WDR97A6NE52 1622 aa3.98□□□□□ -1.77
LINC00560-201ENST00000564593 RNF103O00237 685 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 SLC28A1O00337 649 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 B4GAT1O43505 415 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 HSF2BPO75031 334 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 MTRF1O75570 445 aaKnown RBP3.97□□□□□ -1.77
LINC00560-201ENST00000564593 FGF19O95750 216 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 LYNP07948 512 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 MMP10P09238 476 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 ZSCAN5DPP0CG00 497 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 EDNRAP25101 427 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 KRT31Q15323 416 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 RAB12Q6IQ22 244 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 LCLAT1Q6UWP7 414 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 WDSUB1Q8N9V3 476 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 CCDC197Q8NCU1 140 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 TMEM245Q9H330 911 aa3.97□□□□□ -1.77
LINC00560-201ENST00000564593 UBE2TQ9NPD8 197 aaPredicted RBP3.97□□□□□ -1.77
LINC00560-201ENST00000564593 TEX10Q9NXF1 929 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms