RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 LRIT2A6NDA9 550 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 FIGNL2A6NMB9 653 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 ZWINTO95229 277 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 IGFBP2P18065 325 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 MSX1P28360 303 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 SLC12A2P55011 1212 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 EFTUD2Q15029 972 aaKnown RBP eCLIP19.41■□□□□ 0.7
HERC2-204ENST00000563945 NDUFAF5Q5TEU4 345 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 C16orf47Q6ZP98 133 aaPredicted RBP19.41■□□□□ 0.7
HERC2-204ENST00000563945 SLCO4C1Q6ZQN7 724 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 ADAMTSL2Q86TH1 951 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 DMRTC2Q8IXT2 367 aaPredicted RBP19.41■□□□□ 0.7
HERC2-204ENST00000563945 MYRIPQ8NFW9 859 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 OR5M9Q8NGP3 310 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 SERINC2Q96SA4 455 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 SMC6Q96SB8 1091 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 FAM173AQ9BQD7 235 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 REXO4Q9GZR2 422 aaKnown RBP19.41■□□□□ 0.7
HERC2-204ENST00000563945 AICDAQ9GZX7 198 aa19.41■□□□□ 0.7
HERC2-204ENST00000563945 NPDC1Q9NQX5 325 aaPredicted RBP19.41■□□□□ 0.7
HERC2-204ENST00000563945 CLGNO14967 610 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 CTNSO60931 367 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 CLEC3AO75596 197 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 OR6B1O95007 311 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 HOXD4P09016 255 aaPredicted RBP19.4■□□□□ 0.7
HERC2-204ENST00000563945 CNR1P21554 472 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 ACVR2AP27037 513 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 HNRNPH1P31943 449 aaKnown RBP19.4■□□□□ 0.7
HERC2-204ENST00000563945 SOX3P41225 446 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 GDF5P43026 501 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 GPR143P51810 404 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 MTTPP55157 894 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 XKR6Q5GH73 641 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 TRMT10BQ6PF06 316 aaKnown RBP19.4■□□□□ 0.7
HERC2-204ENST00000563945 RTL4Q6ZR62 310 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 RPRMLQ8N4K4 120 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 MORN4Q8NDC4 146 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 OR2L5Q8NG80 312 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 OR5L2Q8NGL0 311 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 OR14A16Q8NHC5 309 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 SREK1Q8WXA9 508 aaKnown RBP19.4■□□□□ 0.7
HERC2-204ENST00000563945 KIAA1191Q96A73 305 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 LRRC39Q96DD0 335 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 RASL10BQ96S79 203 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 ALOXE3Q9BYJ1 711 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 OR8D2Q9GZM6 311 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 PITHD1Q9GZP4 211 aaPredicted RBP19.4■□□□□ 0.7
HERC2-204ENST00000563945 LDAHQ9H6V9 325 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 EXO5Q9H790 373 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 NT5DC2Q9H857 520 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 CNOT10Q9H9A5 744 aaKnown RBP19.4■□□□□ 0.7
HERC2-204ENST00000563945 PNPLA3Q9NST1 481 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 DEPPQ9NTK1 212 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 TNFRSF10DQ9UBN6 386 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 ACAD8Q9UKU7 415 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 ZNF407Q9C0G0 2248 aa19.4■□□□□ 0.7
HERC2-204ENST00000563945 FAM95CA0A1B0GW59 222 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 OR14I1A6ND48 311 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 G3V3Y1 287 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 PRKNO60260 465 aaPredicted RBP19.39■□□□□ 0.69
HERC2-204ENST00000563945 P04436 131 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 HNRNPFP52597 415 aaKnown RBP19.39■□□□□ 0.69
HERC2-204ENST00000563945 MGAT5Q09328 741 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 TSNQ15631 228 aaKnown RBP19.39■□□□□ 0.69
HERC2-204ENST00000563945 ZNF750Q32MQ0 723 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 EMC4Q5J8M3 183 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 OPN5Q6U736 354 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 B3GNT6Q6ZMB0 384 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 FAM47EQ6ZV65 393 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 TTTY12Q9BZ98 90 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 DDX47Q9H0S4 455 aaKnown RBP19.39■□□□□ 0.69
HERC2-204ENST00000563945 ZDHHC11Q9H8X9 412 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 SACM1LQ9NTJ5 587 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 SPACA6W5XKT8 324 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 DNAJC13O75165 2243 aa19.39■□□□□ 0.69
HERC2-204ENST00000563945 PINLYPA6NC86 204 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 NCF1BA6NI72 391 aaPredicted RBP19.38■□□□□ 0.69
HERC2-204ENST00000563945 NCF1CA8MVU1 366 aaPredicted RBP19.38■□□□□ 0.69
HERC2-204ENST00000563945 KRT38O76015 456 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 NADKO95544 446 aaPredicted RBP19.38■□□□□ 0.69
HERC2-204ENST00000563945 NCF1P14598 390 aaPredicted RBP19.38■□□□□ 0.69
HERC2-204ENST00000563945 ZFP36L2P47974 494 aaKnown RBP19.38■□□□□ 0.69
HERC2-204ENST00000563945 LIM2P55344 173 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 ARL4CP56559 192 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 TFF3Q07654 80 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 SERTAD2Q14140 314 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 SLC10A1Q14973 349 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 MORF4L2Q15014 288 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 HIST2H2ACQ16777 129 aaPredicted RBP19.38■□□□□ 0.69
HERC2-204ENST00000563945 HIST2H2AA3Q6FI13 130 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 TCAIMQ8N3R3 496 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 FAM109AQ8N4B1 249 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 TMEM52Q8NDY8 209 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 C7orf57Q8NEG2 295 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 RHBDF1Q96CC6 855 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 SGCZQ96LD1 299 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 QRFPRQ96P65 431 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 ROGDIQ9GZN7 287 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 IL1RL2Q9HB29 575 aa19.38■□□□□ 0.69
HERC2-204ENST00000563945 IGSF5Q9NSI5 407 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms