RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MIEF2Q96C03 454 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 SMIM10Q96HG1 83 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 COL25A1Q9BXS0 654 aaPredicted RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 DNAAF2Q9NVR5 837 aaKnown RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 VAPAQ9P0L0 249 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 ABCD2Q9UBJ2 740 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 ATXN7L1Q9ULK2 861 aaPredicted RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 ASB4Q9Y574 426 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 RNASET2O00584 256 aaKnown RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 NME4O00746 187 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 NVLO15381 856 aaKnown RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 TCN1P20061 433 aaPredicted RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 COL5A1P20908 1838 aaPredicted RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 CCL7P80098 99 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 LRRC74AQ0VAA2 488 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 COL9A2Q14055 689 aaPredicted RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 KCNAB1Q14722 419 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 RABL3Q5HYI8 236 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 NANOGP8Q6NSW7 305 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 CIDECQ96AQ7 238 aaPredicted RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 GBP5Q96PP8 586 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 PAIP1Q9H074 479 aaKnown RBP20.81■□□□□ 0.92
LINC01960-201ENST00000563759 NANOGQ9H9S0 305 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 ATG4BQ9Y4P1 393 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 PCDHGB2Q9Y5G2 931 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 SLC22A7Q9Y694 548 aa20.81■□□□□ 0.92
LINC01960-201ENST00000563759 SCN2BO60939 215 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 CPSF4O95639 269 aaKnown RBP20.8■□□□□ 0.92
LINC01960-201ENST00000563759 GSNP06396 782 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 DRD2P14416 443 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 ME2P23368 584 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 CDKN2CP42773 168 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 GABRA4P48169 554 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 MTPNP58546 118 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 LRIF1Q5T3J3 769 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 TMEM71Q6P5X7 295 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 NET1Q7Z628 596 aaPredicted RBP20.8■□□□□ 0.92
LINC01960-201ENST00000563759 SLC15A3Q8IY34 581 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 TMEM125Q96AQ2 219 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 DENND2DQ9H6A0 471 aaPredicted RBP20.8■□□□□ 0.92
LINC01960-201ENST00000563759 C5AR2Q9P296 337 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 BTNL2Q9UIR0 455 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 NAALAD2Q9Y3Q0 740 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 PCDHA9Q9Y5H5 950 aa20.8■□□□□ 0.92
LINC01960-201ENST00000563759 A0A1W2PQM1 296 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 PRORSD1PA6NEY8 169 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 ZNF860A6NHJ4 632 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 FLRT2O43155 660 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 TRPC1P48995 793 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 SF3A2Q15428 464 aaKnown RBP20.79■□□□□ 0.92
LINC01960-201ENST00000563759 PRTGQ2VWP7 1150 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 GTDC1Q4AE62 458 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 TCTE1Q5JU00 501 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 TMTC4Q5T4D3 741 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 CYB5D1Q6P9G0 228 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 PRSS41Q7RTY9 318 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 KMT5CQ86Y97 462 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 EXOSC8Q96B26 276 aaKnown RBP20.79■□□□□ 0.92
LINC01960-201ENST00000563759 CCDC115Q96NT0 180 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 ANKRD27Q96NW4 1050 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 MAPKAP1Q9BPZ7 522 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 LRRN3Q9H3W5 708 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 ANKHQ9HCJ1 492 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 SLC6A13Q9NSD5 602 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 CMTM6Q9NX76 183 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 SLC25A37Q9NYZ2 338 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 PHF11Q9UIL8 331 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 PCDHB14Q9Y5E9 798 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 SPEGQ15772 3267 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 TBX19O60806 448 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 PRKRAO75569 313 aaKnown RBP20.79■□□□□ 0.92
LINC01960-201ENST00000563759 AIFM1O95831 613 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 SQSTM1Q13501 440 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 KPNB1Q14974 876 aaKnown RBP20.79■□□□□ 0.92
LINC01960-201ENST00000563759 NDUFA9Q16795 377 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 FAM47BQ8NA70 645 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 FAM156AQ8NDB6 213 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 OR8J3Q8NGG0 315 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 OR4A15Q8NGL6 344 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 WDR60Q8WVS4 1066 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 ZNF764Q96H86 408 aaPredicted RBP20.79■□□□□ 0.92
LINC01960-201ENST00000563759 SLC41A2Q96JW4 573 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 CNDP2Q96KP4 475 aaKnown RBP20.79■□□□□ 0.92
LINC01960-201ENST00000563759 ZNF768Q9H5H4 540 aaKnown RBP20.79■□□□□ 0.92
LINC01960-201ENST00000563759 EHD3Q9NZN3 535 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 SEMA5BQ9P283 1151 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 PCDHGB4Q9UN71 923 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 POMPQ9Y244 141 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 NEUROG3Q9Y4Z2 214 aa20.79■□□□□ 0.92
LINC01960-201ENST00000563759 A0A1W2PR48 441 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 C1orf226A1L170 272 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 GLOD5A6NK44 160 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 TOX3O15405 576 aaPredicted RBP20.78■□□□□ 0.92
LINC01960-201ENST00000563759 PDPK1O15530 556 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 GALR3O60755 368 aaPredicted RBP20.78■□□□□ 0.92
LINC01960-201ENST00000563759 ABCB1P08183 1280 aaPredicted RBP20.78■□□□□ 0.92
LINC01960-201ENST00000563759 NR2F6P10588 404 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 BUD31P41223 144 aaPredicted RBP20.78■□□□□ 0.92
LINC01960-201ENST00000563759 MPEG1Q2M385 716 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 FAM180BQ6P0A1 224 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms