RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 ZNF169Q14929 603 aaPredicted RBP13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 TERF2Q15554 542 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 HIST2H2ACQ16777 129 aaPredicted RBP13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 BTBD16Q32M84 506 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 GGTA1PQ4G0N0 100 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 TMEM35AQ53FP2 167 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 TEX35Q5T0J7 233 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 HIST2H2AA3Q6FI13 130 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 MRM1Q6IN84 353 aaKnown RBP13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 LCA5Q86VQ0 697 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 ZNF227Q86WZ6 799 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 ZNF595Q8IYB9 648 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 IQCKQ8N0W5 287 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 KIF2BQ8N4N8 673 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 DNAJB14Q8TBM8 379 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 CCT6BQ92526 530 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 PHF21BQ96EK2 531 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 CMTM7Q96FZ5 175 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 CDK15Q96Q40 435 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 LPAR4Q99677 370 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 OR51B5Q9H339 312 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 NOL11Q9H8H0 719 aaKnown RBP13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 SLAMF7Q9NQ25 335 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 PSMC3IPQ9P2W1 217 aaPredicted RBP13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 ADGRE2Q9UHX3 823 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 PCDHGA11Q9Y5H2 935 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 EML6Q6ZMW3 1958 aa13.85□□□□□ -0.19
RPUSD1-204ENST00000563560 A0A0A6YYD5 115 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 A0A1W2PPM1 405 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 FOXE1O00358 373 aaPredicted RBP13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 B3GALT2O43825 422 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 DLX3O60479 287 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 CBX6O95503 412 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 HPDP32754 393 aaPredicted RBP13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 PIK3CGP48736 1102 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 RPS13P62277 151 aaKnown RBP13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 CUL3Q13618 768 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 TLR1Q15399 786 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 CRLF3Q8IUI8 442 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 LGI4Q8N135 537 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 ZCCHC7Q8N3Z6 543 aaKnown RBP13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 CISD2Q8N5K1 135 aaKnown RBP13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 FAM47BQ8NA70 645 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 ACMSDQ8TDX5 336 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 ADAMTS18Q8TE60 1221 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 ANKRD9Q96BM1 317 aaPredicted RBP13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 FAR2Q96K12 515 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 TAAR6Q96RI8 345 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 MTERF1Q99551 399 aaKnown RBP13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 EPS8L2Q9H6S3 715 aa13.84□□□□□ -0.19
RPUSD1-204ENST00000563560 TMEM200CA6NKL6 621 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 SAP18O00422 153 aaKnown RBP13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 CTNSO60931 367 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 SH3BGRLO75368 114 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 EEDO75530 441 aaKnown RBP13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 CLDN9O95484 217 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 PYGBP11216 843 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 PCNAP12004 261 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 GNLYP22749 145 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 NEK2P51955 445 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 VSNL1P62760 191 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 AP2B1P63010 937 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 CPSF6Q16630 551 aaKnown RBP eCLIP13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 UNC50Q53HI1 259 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 ACER2Q5QJU3 275 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 IRAK1BP1Q5VVH5 260 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 FCRLBQ6BAA4 426 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 OR4C11Q6IEV9 310 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 LETMD1Q6P1Q0 360 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 BEST3Q8N1M1 668 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 MDS2Q8NDY4 140 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 SRFBP1Q8NEF9 429 aaKnown RBP13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 PTPMT1Q8WUK0 201 aaPredicted RBP13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 TMEM237Q96Q45 408 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 ROGDIQ9GZN7 287 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 ILKAPQ9H0C8 392 aaPredicted RBP13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 DDX31Q9H8H2 851 aaKnown RBP13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 TRIM45Q9H8W5 580 aaPredicted RBP13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 ACTR8Q9H981 624 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 PRTFDC1Q9NRG1 225 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 ASB4Q9Y574 426 aa13.83□□□□□ -0.2
RPUSD1-204ENST00000563560 A0A088AWK7 358 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 IQANK1A0A1B0GTG1 560 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 OR5H15A6NDH6 313 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 G3V2L1 256 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 GOLGA8RI6L899 631 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 PSMD12O00232 456 aaPredicted RBP13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 TMPRSS11DO60235 418 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 PRKNO60260 465 aaPredicted RBP13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 SMIM24O75264 130 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 F10P00742 488 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 ZNF10P21506 573 aaPredicted RBP13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 HSD17B3P37058 310 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 TDGF1P3P51864 188 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 HNRNPH2P55795 449 aaKnown RBP13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 HERVK_113P63132 956 aa13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 MRPL49Q13405 166 aaKnown RBP13.82□□□□□ -0.2
RPUSD1-204ENST00000563560 TUBA3CQ13748 450 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms