RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 Q6ZSR9 355 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 TBC1D20Q96BZ9 403 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 ACTL8Q9H568 366 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 TMED5Q9Y3A6 229 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 PTRH2Q9Y3E5 179 aaKnown RBP17.77■□□□□ 0.44
RAB40C-207ENST00000563109 PCDHGA6Q9Y5G7 932 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 AKAP13Q12802 2813 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 ATP6AP2A0A1C7CYW4 349 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 VSTM2BA6NLU5 285 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 TERTO14746 1132 aaKnown RBP17.76■□□□□ 0.43
RAB40C-207ENST00000563109 ATP6AP2O75787 350 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 GBAP04062 536 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 CAPNS1P04632 268 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 FHP07954 510 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 VIMP08670 466 aaKnown RBP17.76■□□□□ 0.43
RAB40C-207ENST00000563109 CPN2P22792 545 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 MAPK1P28482 360 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 TPP2P29144 1249 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-207ENST00000563109 TLX1P31314 330 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-207ENST00000563109 BUD31P41223 144 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-207ENST00000563109 TUBB8Q3ZCM7 444 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 MINDY4Q4G0A6 757 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 VWA2Q5GFL6 755 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 GPR180Q86V85 440 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 PRSS58Q8IYP2 241 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 FAM47BQ8NA70 645 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 OR2Y1Q8NGV0 311 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 C3orf30Q96M34 536 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 MAPKAP1Q9BPZ7 522 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 CRB3Q9BUF7 120 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 EBPLQ9BY08 206 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 SOX17Q9H6I2 414 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-207ENST00000563109 WDR41Q9HAD4 459 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 MEAF6Q9HAF1 191 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 SIRT5Q9NXA8 310 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 TCFL5Q9UL49 500 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 RAXQ9Y2V3 346 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 USH1CQ9Y6N9 552 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 NCOR2Q9Y618 2525 aa17.76■□□□□ 0.43
RAB40C-207ENST00000563109 BLACEA4D250 179 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 TMPRSS11DO60235 418 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 EDF1O60869 148 aaKnown RBP17.75■□□□□ 0.43
RAB40C-207ENST00000563109 DNAJB6O75190 326 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 PEX11AO75192 247 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 BMP10O95393 424 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 HEXBP07686 556 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 ANXA4P09525 319 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-207ENST00000563109 NR2F6P10588 404 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 GSTM5P46439 218 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 RPS18P62269 152 aaKnown RBP17.75■□□□□ 0.43
RAB40C-207ENST00000563109 TRA2BP62995 288 aaKnown RBP17.75■□□□□ 0.43
RAB40C-207ENST00000563109 TNFRSF17Q02223 184 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 KLC1Q07866 573 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 MAD2L1Q13257 205 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-207ENST00000563109 MRM1Q6IN84 353 aaKnown RBP17.75■□□□□ 0.43
RAB40C-207ENST00000563109 NOXRED1Q6NXP6 359 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 GALNT18Q6P9A2 607 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 SHISA6Q6ZSJ9 500 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 PROSER1Q86XN7 944 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 FNDC5Q8NAU1 212 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 CCNL2Q96S94 520 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-207ENST00000563109 SPSB2Q99619 263 aa17.75■□□□□ 0.43
RAB40C-207ENST00000563109 POLR3HQ9Y535 204 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-207ENST00000563109 CLDN4O14493 209 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 CNOT3O75175 753 aaKnown RBP17.74■□□□□ 0.43
RAB40C-207ENST00000563109 CDC123O75794 336 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-207ENST00000563109 CYC1P08574 325 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 F8A1P23610 371 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 HNRNPH2P55795 449 aaKnown RBP17.74■□□□□ 0.43
RAB40C-207ENST00000563109 RAE1P78406 368 aaKnown RBP17.74■□□□□ 0.43
RAB40C-207ENST00000563109 MC1RQ01726 317 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 ZNF763Q0D2J5 394 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 SPACA3Q8IXA5 215 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 ZNF595Q8IYB9 648 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 LRRC34Q8IZ02 419 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 ZSCAN1Q8NBB4 408 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 CDC26Q8NHZ8 85 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 STARD8Q92502 1023 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 CSF3RQ99062 836 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 FAIM2Q9BWQ8 316 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 KCMF1Q9P0J7 381 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 IL17BQ9UHF5 180 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 C3orf18Q9UK00 162 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 MKL2Q9ULH7 1088 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 ASB4Q9Y574 426 aa17.74■□□□□ 0.43
RAB40C-207ENST00000563109 SEC16AO15027 2179 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 IDSB3KWA1 339 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 SDHDO14521 159 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 POLR3GO15318 223 aaPredicted RBP17.73■□□□□ 0.43
RAB40C-207ENST00000563109 DIAPH2O60879 1101 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 B4GALT2O60909 372 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 JRKO75564 520 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 KLF7O75840 302 aaPredicted RBP17.73■□□□□ 0.43
RAB40C-207ENST00000563109 TGDSO95455 350 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 IGHEP01854 428 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 TROVE2P10155 538 aaKnown RBP eCLIP17.73■□□□□ 0.43
RAB40C-207ENST00000563109 ACPPP15309 386 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 EMP2P54851 167 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 ERV3-1Q14264 604 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 SMU1Q2TAY7 513 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms