RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 MRPL28Q13084 256 aaKnown RBP13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 HNRNPA0Q13151 305 aaKnown RBP13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 SERINC3Q13530 473 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 ZNF235Q14590 738 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 ZRANB3Q5FWF4 1079 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 CIR1Q86X95 450 aaPredicted RBP13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 LGI4Q8N135 537 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 SPPL2AQ8TCT8 520 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 TESCQ96BS2 214 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 PLD4Q96BZ4 506 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 ARMC5Q96C12 935 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 ZBED6CLQ96FA7 236 aaPredicted RBP13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 MAGEB10Q96LZ2 347 aaPredicted RBP13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 EGFL8Q99944 293 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 GALNT9Q9HCQ5 603 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 PLEKHB1Q9UF11 243 aaPredicted RBP13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 FKBPLQ9UIM3 349 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 PADI2Q9Y2J8 665 aa13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 LSM2Q9Y333 95 aaKnown RBP13.11□□□□□ -0.31
AC040174.1-201ENST00000563003 HYKKA2RU49 373 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 SH3D21A4FU49 640 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 GPR39O43194 453 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 GLUD1P00367 558 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 APEX1P27695 318 aaKnown RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 PTGES3Q15185 160 aaKnown RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 SPHARQ15513 63 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 WSCD2Q2TBF2 565 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 TEX261Q6UWH6 196 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 RNF165Q6ZSG1 346 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ZNF680Q8NEM1 530 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 OR9Q2Q8NGE9 314 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 LHFPL5Q8TAF8 219 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 NELL1Q92832 810 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 TRIM43Q96BQ3 446 aaPredicted RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 MYEOVQ96EZ4 313 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ZC3HAV1LQ96H79 300 aaKnown RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 SLC7A5P2Q9GIP4 190 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 PPIL3Q9H2H8 161 aaKnown RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 BPIFA1Q9NP55 256 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 SSR3Q9UNL2 185 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 U3KQ87 197 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ANAPC1Q9H1A4 1944 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ATP6V1G2-DDX39BF2Z307 99 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ADAMDEC1O15204 470 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 CSO75390 466 aaKnown RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 AP2A2O94973 939 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 MSL3P1P0C860 447 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 GLULP15104 373 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ARSBP15848 533 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 SDC1P18827 310 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 SLC6A4P31645 630 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 TALDO1P37837 337 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 KIR3DL1P43629 444 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ALDH9A1P49189 494 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 CDH12P55289 794 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 CDC42P60953 191 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 RGS1Q08116 209 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 NFE2L1Q14494 772 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 TAF1AQ15573 450 aaPredicted RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 CPSF6Q16630 551 aaKnown RBP eCLIP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 DUOXA1Q1HG43 343 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 KLHL17Q6TDP4 642 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 PTCHD4Q6ZW05 846 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 CPA6Q8N4T0 437 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 GALNT11Q8NCW6 608 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 C19orf18Q8NEA5 215 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 CD244Q9BZW8 370 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 KCNN2Q9H2S1 579 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 CLN6Q9NWW5 311 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 MAFFQ9ULX9 164 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 DHRS7Q9Y394 339 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 ACTL7AQ9Y615 435 aa13.1□□□□□ -0.31
AC040174.1-201ENST00000563003 C2orf81A6NN90 581 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 PRRG1O14668 218 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 BET1O15155 118 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 RFPL3O75679 317 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 PDYNP01213 254 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 EBLN1P0CF75 366 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 CLCN4P51793 760 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 CLDN20P56880 219 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 CTAG1AP78358 180 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 VEZF1Q14119 521 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 MICAQ29983 383 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 EXOC3L2Q2M3D2 409 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 DDI2Q5TDH0 399 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 CDH24Q86UP0 819 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 TRIM69Q86WT6 500 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 SLC34A3Q8N130 599 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 SYNPOQ8N3V7 929 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 OR4C15Q8NGM1 316 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 MAL2Q969L2 176 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 GPR137Q96N19 417 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms