RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SEC16BQ96JE7 1060 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 ZNF559Q9BR84 538 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 OR8D2Q9GZM6 311 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 REXO4Q9GZR2 422 aaKnown RBP12.07□□□□□ -0.48
SF3B3-202ENST00000562722 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-202ENST00000562722 DEPPQ9NTK1 212 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 WWOXQ9NZC7 414 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 MYOTQ9UBF9 498 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 SNX12Q9UMY4 172 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 PPIEQ9UNP9 301 aaKnown RBP12.07□□□□□ -0.48
SF3B3-202ENST00000562722 PSAT1Q9Y617 370 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 ADGRG4Q8IZF6 3080 aa12.07□□□□□ -0.48
SF3B3-202ENST00000562722 C2CD3Q4AC94 2353 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 A0A0G2JMM0 328 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 A0A1W2PPB8 328 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 A0A1W2PRS3 328 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 PINLYPA6NC86 204 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 SYNDIG1LA6NDD5 238 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 KIR3DP1A8MWS1 328 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 CLEC3AO75596 197 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 GSTM2P28161 218 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 SLC6A12P48065 614 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 NR0B1P51843 470 aaKnown RBP12.06□□□□□ -0.48
SF3B3-202ENST00000562722 MTTPP55157 894 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 LIM2P55344 173 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 NUP107P57740 925 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 TAS2R39P59534 338 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 TGM3Q08188 693 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 MYBPHQ13203 477 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 TESK1Q15569 626 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 XKR6Q5GH73 641 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 STEAP4Q687X5 459 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 ZNF585AQ6P3V2 769 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 SPNS3Q6ZMD2 512 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 RTL4Q6ZR62 310 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 RGS9BPQ6ZS82 235 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 GK5Q6ZS86 529 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 ZC3HC1Q86WB0 502 aaKnown RBP12.06□□□□□ -0.48
SF3B3-202ENST00000562722 KLHL7Q8IXQ5 586 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 OR2L5Q8NG80 312 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 ANKRD49Q8WVL7 239 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 ANKRD7Q92527 254 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 DAZLQ92904 295 aaKnown RBP12.06□□□□□ -0.48
SF3B3-202ENST00000562722 RHBDF1Q96CC6 855 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 LRRC39Q96DD0 335 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 RASL10BQ96S79 203 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 SERINC2Q96SA4 455 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 SMC6Q96SB8 1091 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 CSF3RQ99062 836 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 TREX2Q9BQ50 279 aaPredicted RBP12.06□□□□□ -0.48
SF3B3-202ENST00000562722 CAPS2Q9BXY5 557 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 TTTY12Q9BZ98 90 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 PLSCR2Q9NRY7 297 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 PNPLA3Q9NST1 481 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 TEX264Q9Y6I9 313 aa12.06□□□□□ -0.48
SF3B3-202ENST00000562722 GTF3C1Q12789 2109 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 FIGNL2A6NMB9 653 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 CTNSO60931 367 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 TOXO94900 526 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 ZWINTO95229 277 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 CD1EP15812 388 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 MSX1P28360 303 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 GPR143P51810 404 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 ART1P52961 327 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 DR1Q01658 176 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 PDIA2Q13087 525 aaKnown RBP12.05□□□□□ -0.48
SF3B3-202ENST00000562722 EFTUD2Q15029 972 aaKnown RBP eCLIP12.05□□□□□ -0.481e-9■■■■□ 19.6
SF3B3-202ENST00000562722 ZNF750Q32MQ0 723 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 GXYLT1Q4G148 440 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 FBXO48Q5FWF7 155 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 EMC4Q5J8M3 183 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 NDUFAF5Q5TEU4 345 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 CES4AQ5XG92 561 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 CAPN12Q6ZSI9 719 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 FAM47EQ6ZV65 393 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 MORN4Q8NDC4 146 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 OR14A16Q8NHC5 309 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 SLCO2A1Q92959 643 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 KIAA1191Q96A73 305 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 RUNDC3BQ96NL0 473 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 QRFPRQ96P65 431 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 FAM173AQ9BQD7 235 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 WDR83Q9BRX9 315 aaKnown RBP12.05□□□□□ -0.48
SF3B3-202ENST00000562722 ALOXE3Q9BYJ1 711 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 LDAHQ9H6V9 325 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 EXO5Q9H790 373 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 CNOT10Q9H9A5 744 aaKnown RBP12.05□□□□□ -0.48
SF3B3-202ENST00000562722 DNAJC11Q9NVH1 559 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 GPRC5BQ9NZH0 403 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 DAPP1Q9UN19 280 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 SPACA6W5XKT8 324 aa12.05□□□□□ -0.48
SF3B3-202ENST00000562722 DCHS2Q6V1P9 2916 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ATP6AP2A0A1C7CYW4 349 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 TMEM200CA6NKL6 621 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 C17orf105B2RV13 164 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 CES2O00748 559 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 BCKDKO14874 412 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ATP6AP2O75787 350 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 S100BP04271 92 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-202ENST00000562722 P04436 131 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms