RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 LYRM4Q9HD34 91 aa16.69■□□□□ 0.26
CMTM3-204ENST00000562357 ZNF180Q9UJW8 692 aa16.69■□□□□ 0.26
CMTM3-204ENST00000562357 PCDHGA11Q9Y5H2 935 aa16.69■□□□□ 0.26
CMTM3-204ENST00000562357 PRRC2CQ9Y520 2896 aaKnown RBP16.69■□□□□ 0.26
CMTM3-204ENST00000562357 E2F3O00716 465 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 FCHO1O14526 889 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 UGDHO60701 494 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 SMIM24O75264 130 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 TGFB1P01137 390 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 IFNA16P05015 189 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 COL6A2P12110 1019 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 EEF1DP29692 281 aaKnown RBP16.68■□□□□ 0.26
CMTM3-204ENST00000562357 ECHS1P30084 290 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 PIK3CBP42338 1070 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 CLCN2P51788 898 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 PER3P56645 1201 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 STX4Q12846 297 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 GTF2H2Q13888 395 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 PCBP2Q15366 365 aaKnown RBP eCLIP16.68■□□□□ 0.26
CMTM3-204ENST00000562357 TECRLQ5HYJ1 363 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 KHDRBS2Q5VWX1 349 aaKnown RBP16.68■□□□□ 0.26
CMTM3-204ENST00000562357 GTF2H2CQ6P1K8 395 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 SCUBE1Q8IWY4 988 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 KIF2BQ8N4N8 673 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 AMER2Q8N7J2 671 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 ACOT4Q8N9L9 421 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 B3GNT7Q8NFL0 401 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 UHMK1Q8TAS1 419 aaKnown RBP16.68■□□□□ 0.26
CMTM3-204ENST00000562357 ATP6V1E2Q96A05 226 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 ISL2Q96A47 359 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 PSMG3-AS1Q96PY0 264 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 ADAP2Q9NPF8 381 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 PRDM7Q9NQW5 492 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 ANKRD10Q9NXR5 420 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 NFU1Q9UMS0 254 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 PCDHGB6Q9Y5F9 930 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 CLCA3PQ9Y6N3 262 aa16.68■□□□□ 0.26
CMTM3-204ENST00000562357 TRBV11-1A0A0K0K1C0 115 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 KLK8O60259 260 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 CTNSO60931 367 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 SH3BGRLO75368 114 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 TBX6O95947 436 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-204ENST00000562357 ABHD2P08910 425 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 HIST1H1TP22492 207 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-204ENST00000562357 CD96P40200 585 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 UBAP2Q5T6F2 1119 aaKnown RBP16.67■□□□□ 0.26
CMTM3-204ENST00000562357 TRMT10CQ7L0Y3 403 aaKnown RBP16.67■□□□□ 0.26
CMTM3-204ENST00000562357 CLNKQ7Z7G1 428 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 TMEM132CQ8N3T6 1108 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 PTGR2Q8N8N7 351 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-204ENST00000562357 HUS1BQ8NHY5 278 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 TMEM125Q96AQ2 219 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 RGMAQ96B86 450 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 VMP1Q96GC9 406 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 TAAR6Q96RI8 345 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 IPPKQ9H8X2 491 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 KLHL1Q9NR64 748 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 LRFN1Q9P244 771 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 XPR1Q9UBH6 696 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 OSGIN2Q9Y236 505 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 USP9XQ93008 2570 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-204ENST00000562357 SCN2AQ99250 2005 aa16.67■□□□□ 0.26
CMTM3-204ENST00000562357 TRIM49D1C9J1S8 452 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 SNRPAP09012 282 aaKnown RBP16.66■□□□□ 0.26
CMTM3-204ENST00000562357 ATP5A1P25705 553 aaKnown RBP16.66■□□□□ 0.26
CMTM3-204ENST00000562357 MAGEA12P43365 314 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 CYB561P49447 251 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 SERTAD2Q14140 314 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 ELAVL1Q15717 326 aaKnown RBP16.66■□□□□ 0.26
CMTM3-204ENST00000562357 CPSF6Q16630 551 aaKnown RBP eCLIP16.66■□□□□ 0.26
CMTM3-204ENST00000562357 DEPDC1Q5TB30 811 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 GFRALQ6UXV0 394 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 GOLGA7Q7Z5G4 137 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 CPAMD8Q8IZJ3 1885 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 CNPY4Q8N129 248 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 NFAM1Q8NET5 270 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-204ENST00000562357 DAZLQ92904 295 aaKnown RBP16.66■□□□□ 0.26
CMTM3-204ENST00000562357 GPR78Q96P69 363 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 CSF3RQ99062 836 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 MTERF1Q99551 399 aaKnown RBP16.66■□□□□ 0.26
CMTM3-204ENST00000562357 OR51B5Q9H339 312 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 DMRT3Q9NQL9 472 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 MS4A12Q9NXJ0 267 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 ERRFI1Q9UJM3 462 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-204ENST00000562357 FBXW2Q9UKT8 454 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 TSC22D4Q9Y3Q8 395 aa16.66■□□□□ 0.26
CMTM3-204ENST00000562357 H0YIV9 168 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 STX16-NPEPL1H3BU86 382 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 SAP18O00422 153 aaKnown RBP16.65■□□□□ 0.26
CMTM3-204ENST00000562357 RTCAO00442 366 aaKnown RBP16.65■□□□□ 0.26
CMTM3-204ENST00000562357 CYR61O00622 381 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 STX16O14662 325 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 SCELO95171 688 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 CLDN9O95484 217 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 RHOXF2BP0C7M4 288 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 COX7A2P14406 83 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 TNNI3P19429 210 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 CPN2P22792 545 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 PTX3P26022 381 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-204ENST00000562357 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms