RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 RUNDC3AQ59EK9 446 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 RABL3Q5HYI8 236 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 NDUFAF5Q5TEU4 345 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 NKAIN2Q5VXU1 208 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ANKRD46Q86W74 232 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 EID2Q8N6I1 236 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 TRIML2Q8N7C3 387 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 Q8N9G6 341 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 TNIP2Q8NFZ5 429 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 GOT1L1Q8NHS2 421 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 WDR60Q8WVS4 1066 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 KCTD14Q9BQ13 255 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 CPPED1Q9BRF8 314 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 INPP5KQ9BT40 448 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 GTPBP2Q9BX10 602 aaKnown RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ARRDC1-AS1Q9H2J1 176 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ALG2Q9H553 416 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 LYRM4Q9HD34 91 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 FAM60AQ9NP50 221 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ENAMQ9NRM1 1142 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 TEX10Q9NXF1 929 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 MS4A12Q9NXJ0 267 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 SLC25A37Q9NYZ2 338 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 VAPAQ9P0L0 249 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 SLAMF8Q9P0V8 285 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ZNF282Q9UDV7 671 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 BTBD3Q9Y2F9 522 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 NEUROG3Q9Y4Z2 214 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 GMEB1Q9Y692 573 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 SPACA6W5XKT8 324 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 COL5A1P20908 1838 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 IGHV5-51A0A0C4DH38 117 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 LY6G6EA0A0G2JKS1 128 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 EVPLLA8MZ36 301 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
COMMD4-205ENST00000562310 PRAMEF10O60809 474 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 FKBP6O75344 327 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 BCAS2O75934 225 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-205ENST00000562310 ATP6V1G2O95670 118 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 NR2F6P10588 404 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 CKMT1AP12532 417 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 CSF2RBP32927 897 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 BUD31P41223 144 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-205ENST00000562310 GABRA4P48169 554 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 ALDH9A1P49189 494 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 GSK3BP49841 420 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 HSD11B2P80365 405 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 PLIN5Q00G26 463 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 TNFRSF17Q02223 184 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 LIPEQ05469 1076 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 MAP7Q14244 749 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 PROX2Q3B8N5 592 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 GARNL3Q5VVW2 1013 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 GUSBP11Q6P575 273 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 MSRB3Q8IXL7 192 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 EFCAB3Q8N7B9 438 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 RNF148Q8N7C7 305 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 OR4A15Q8NGL6 344 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 ZFP28Q8NHY6 868 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 N4BP2L2Q92802 583 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-205ENST00000562310 MIEF2Q96C03 454 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 ZBED6CLQ96FA7 236 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-205ENST00000562310 ECSITQ9BQ95 431 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 CLK4Q9HAZ1 481 aaKnown RBP13.54□□□□□ -0.24
COMMD4-205ENST00000562310 NEUROD4Q9HD90 331 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 ACSS1Q9NUB1 689 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-205ENST00000562310 GIMAP4Q9NUV9 329 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 PCDHB14Q9Y5E9 798 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 U3KQA8 63 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
COMMD4-205ENST00000562310 A0A1W2PRB8 838 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 CPED1A4D0V7 1026 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 FAM86C2PA6NEL3 165 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 SH3BP5O60239 455 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 GALR3O60755 368 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 ENTPD5O75356 428 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 CPSF4O95639 269 aaKnown RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 AIFM1O95831 613 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 ANKRD34CP0C6C1 535 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 MSL3P1P0C860 447 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 HTR1EP28566 365 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 NTSP30990 170 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 TLX1P31314 330 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 FRKP42685 505 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 CDKN2CP42773 168 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 GRK6P43250 576 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 MTPNP58546 118 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 DAB2P98082 770 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 MLC1Q15049 377 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 MUM1Q2TAK8 710 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 DEFB110Q30KQ9 67 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 AASDHQ4L235 1098 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 DEFB134Q4QY38 66 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 PLA2G2CQ5R387 149 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 FBXW10Q5XX13 1052 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 TMEM71Q6P5X7 295 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 AAGABQ6PD74 315 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms