RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MRM1Q6IN84 353 aaKnown RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ANKRD26P1Q6NSI1 321 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 HMBOX1Q6NT76 420 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 CYP2R1Q6VVX0 501 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF793Q6ZN11 406 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 C1orf122Q6ZSJ8 110 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 IKBIPQ70UQ0 350 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 SPATC1Q76KD6 591 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 VN1R4Q7Z5H5 301 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 SYT9Q86SS6 491 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 GPR180Q86V85 440 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 IQCHQ86VS3 1027 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ANKRD46Q86W74 232 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ATCAYQ86WG3 371 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 C17orf82Q86X59 251 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ANKRD13BQ86YJ7 626 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 DCP2Q8IU60 420 aaKnown RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 TMEM126BQ8IUX1 230 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 PLD3Q8IV08 490 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 PHACTR4Q8IZ21 702 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 CLECL1Q8IZS7 167 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 MMP21Q8N119 569 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 NAGSQ8N159 534 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 RAB42Q8N4Z0 105 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 DTWD1Q8N5C7 304 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 CAMKK1Q8N5S9 505 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 DTWD2Q8NBA8 298 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 MFSD9Q8NBP5 474 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 OR4E2Q8NGC2 313 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 OR52E4Q8NGH9 312 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 LCN9Q8WX39 176 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 DNASE2BQ8WZ79 361 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 STARD8Q92502 1023 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 SH3KBP1Q96B97 665 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 TM4SF18Q96CE8 201 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 MTERF3Q96E29 417 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 KLHDC7BQ96G42 594 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 AURKBQ96GD4 344 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF764Q96H86 408 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF570Q96NI8 536 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 TEFMQ96QE5 360 aaKnown RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 OR2A14Q96R47 310 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 PKP2Q99959 881 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 KCTD14Q9BQ13 255 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 DPH7Q9BTV6 452 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 DUSP26Q9BV47 211 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 LRRC61Q9BV99 259 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 GSDMCQ9BYG8 508 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 BHLHE41Q9C0J9 482 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 CHST8Q9H2A9 424 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 KLHL31Q9H511 634 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 REEP4Q9H6H4 257 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 RPF2Q9H7B2 306 aaKnown RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 DDX31Q9H8H2 851 aaKnown RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 MRPS30Q9NP92 439 aaKnown RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 CCM2LQ9NUG4 571 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ARMC1Q9NVT9 282 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ACTR10Q9NZ32 417 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 C6orf203Q9P0P8 240 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 CPNE7Q9UBL6 633 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 BCAP29Q9UHQ4 241 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 RAPGEFL1Q9UHV5 662 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ADAM29Q9UKF5 820 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 PILRAQ9UKJ1 303 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 AP3M1Q9Y2T2 418 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 WBP11Q9Y2W2 641 aaKnown RBP6.22□□□□□ -1.41
CAPN3-210ENST00000561817 HCN4Q9Y3Q4 1203 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 AP1M2Q9Y6Q5 423 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF318Q5VUA4 2279 aa6.22□□□□□ -1.41
CAPN3-210ENST00000561817 SPAG17Q6Q759 2223 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CUL9Q8IWT3 2517 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TRBV23OR9-2A0A075B6M9 112 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 KIR2DS5A0A0G2JLQ3 304 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 A0A0G2JNG1 304 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 ANKDD1BA6NHY2 528 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 OR5K4A6NMS3 321 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 FAM220BPB1ANY3 271 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 J3KRW8 73 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 KIR2DS3K7RE56 304 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 RTCAO00442 366 aaKnown RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 RNASET2O00584 256 aaKnown RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 NVLO15381 856 aaKnown RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 NDUFS4O43181 175 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 OR1F1O43749 312 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TMPRSS11DO60235 418 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SCELO95171 688 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CCNDBP1O95273 360 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 BAG2O95816 211 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 GBAP04062 536 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CSF2P04141 144 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 GSNP06396 782 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 ABCB1P08183 1280 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 IL3P08700 152 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SMIM10L1P0DMW3 83 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 COX7A2P14406 83 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 NME1P15531 152 aaKnown RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 NCK1P16333 377 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 UGT2B7P16662 529 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 GPX2P18283 190 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 GSTM2P28161 218 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms