RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 THAP7Q9BT49 309 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 ADGRE3Q9BY15 652 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 TRIM31Q9BZY9 425 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 NSRP1Q9H0G5 558 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 TP63Q9H3D4 680 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 CENPHQ9H3R5 247 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 FBXO44Q9H4M3 255 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 ZDHHC6Q9H6R6 413 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 AKIRIN1Q9H9L7 192 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 PCDH9Q9HC56 1237 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 OLAHQ9NV23 265 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 GRHL1Q9NZI5 618 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 FAM153AQ9UHL3 310 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 SLC24A2Q9UI40 661 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 LNPEPQ9UIQ6 1025 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 SIX4Q9UIU6 781 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 STAP1Q9ULZ2 295 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 NFS1Q9Y697 457 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 COX11Q9Y6N1 276 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 HIVEP2P31629 2446 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 hCG_1818297A0A087WSY0 165 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 MAGEB16A2A368 324 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 C2CD4BA6NLJ0 364 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 FOXO6A8MYZ6 492 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 HACD1B0YJ81 288 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 E7EVH7 732 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 GOLGA8SH3BPF8 625 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 XPO1O14980 1071 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 ZW10O43264 779 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 DHHO43323 396 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 RIPK2O43353 540 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CREB3O43889 395 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CST8O60676 142 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SLCO2B1O94956 709 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TRUB2O95900 331 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 TNFP01375 233 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 NHLRC4P0CG21 123 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 APEHP13798 732 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 AGAP20933 346 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 IVDP26440 423 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 PTPN4P29074 926 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 MIPP30301 263 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 MAGEA4P43358 317 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 MARCKSL1P49006 195 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 HCAR3P49019 387 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CASP6P55212 293 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 HNRNPH2P55795 449 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 ARL4CP56559 192 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TAS2R40P59535 323 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 EIF3EP60228 445 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 SRP54P61011 504 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 RPL7AP62424 266 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 RPS15P62841 145 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 YWHAZP63104 245 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 GNGT1P63211 74 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 MRPS25P82663 173 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 OTUD4Q01804 1114 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 CFHR3Q02985 330 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 DMPKQ09013 629 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 BST2Q10589 180 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 ILF2Q12905 390 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 SNX1Q13596 522 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CBFBQ13951 182 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 KRT81Q14533 505 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TRADDQ15628 312 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 UAP1Q16222 522 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 C3AR1Q16581 482 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 ALG11Q2TAA5 492 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 KLHL38Q2WGJ6 581 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SLC25A52Q3SY17 297 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 PTPN20Q4JDL3 420 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 ERMARDQ5T6L9 678 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 VWA5B1Q5TIE3 1220 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 PRAMEF17Q5VTA0 474 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 FAM69BQ5VUD6 431 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 ARMC3Q5W041 872 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 FAM90A2PQ658T7 463 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 KCTD16Q68DU8 428 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SUMO4Q6EEV6 95 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TTC27Q6P3X3 843 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 C16orf89Q6UX73 402 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 MFSD7Q6UXD7 560 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 DCDC5Q6ZRR9 648 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CYS1Q717R9 158 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SLC26A9Q7LBE3 791 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 STRADAQ7RTN6 431 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CPLX4Q7Z7G2 160 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SCD5Q86SK9 330 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TADA2BQ86TJ2 420 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SYVN1Q86TM6 617 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TRABD2AQ86V40 505 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CHSY1Q86X52 802 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 ZNF354CQ86Y25 554 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 DNAAF5Q86Y56 855 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 LRRC49Q8IUZ0 686 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CDKL3Q8IVW4 592 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 MFN1Q8IWA4 741 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SLC44A2Q8IWA5 706 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 NKAPQ8N5F7 415 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 OTUD6BQ8N6M0 293 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms