RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 C6orf132Q5T0Z8 1188 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 OGFRL1Q5TC84 451 aaPredicted RBP16.25■□□□□ 0.19
HDDC3-206ENST00000561036 NDUFAF5Q5TEU4 345 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 MMP21Q8N119 569 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 ADCY4Q8NFM4 1077 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 TRAPPC9Q96Q05 1148 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 SERINC2Q96SA4 455 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 PKP2Q99959 881 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 MACROD1Q9BQ69 325 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 CHRNA10Q9GZZ6 450 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 NEUROD4Q9HD90 331 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 C1GALT1Q9NS00 363 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 OLAHQ9NV23 265 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 UCKL1Q9NWZ5 548 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 TEX10Q9NXF1 929 aaPredicted RBP16.25■□□□□ 0.19
HDDC3-206ENST00000561036 PHF11Q9UIL8 331 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 PILRBQ9UKJ0 227 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 FBXO4Q9UKT5 387 aa16.25■□□□□ 0.19
HDDC3-206ENST00000561036 SNRNP200O75643 2136 aaKnown RBP16.25■□□□□ 0.19
HDDC3-206ENST00000561036 RHPN2P1A8MT19 583 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 KCNK5O95279 499 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 STATHP02808 62 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 ZNF888P0CJ79 500 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-206ENST00000561036 PVRP15151 417 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 EFNA1P20827 205 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-206ENST00000561036 CDH3P22223 829 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 MANFP55145 182 aaKnown RBP16.24■□□□□ 0.19
HDDC3-206ENST00000561036 RAB8AP61006 207 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 BTN3A2P78410 334 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 GAB1Q13480 694 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 VEZF1Q14119 521 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 TRIP10Q15642 601 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 PLK5Q496M5 336 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 TBCELQ5QJ74 424 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 ZCCHC8Q6NZY4 707 aaKnown RBP16.24■□□□□ 0.19
HDDC3-206ENST00000561036 MAML2Q8IZL2 1156 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-206ENST00000561036 EID3Q8N140 333 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 LILRA2Q8N149 483 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 CARFQ8N187 725 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 ARL10Q8N8L6 244 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 C19orf47Q8N9M1 422 aaKnown RBP16.24■□□□□ 0.19
HDDC3-206ENST00000561036 TMEM102Q8N9M5 508 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-206ENST00000561036 KCT2Q8NC54 265 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 OR52N2Q8NGI0 321 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 PSMA8Q8TAA3 256 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 TCTN2Q96GX1 697 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 FCRL4Q96PJ5 515 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 CD180Q99467 661 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 ELF4Q99607 663 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-206ENST00000561036 SLC35A5Q9BS91 424 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 UGT2B28Q9BY64 529 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 KLHL4Q9C0H6 718 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 CHST8Q9H2A9 424 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 SLC35C2Q9NQQ7 365 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 ZSCAN32Q9NX65 697 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 SNX11Q9Y5W9 270 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 THADAQ6YHU6 1953 aa16.24■□□□□ 0.19
HDDC3-206ENST00000561036 TDRD6O60522 2096 aaKnown RBP16.23■□□□□ 0.19
HDDC3-206ENST00000561036 LOC105369274A0A096LPK9 316 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 LOC102723532A0A0G2JNH3 316 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 A0A1W2PR48 441 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 TMEM221A6NGB7 291 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 M0R296 226 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 P2RX6O15547 441 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 PROM1O43490 865 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 NUDT21O43809 227 aaKnown RBP16.23■□□□□ 0.19
HDDC3-206ENST00000561036 B3GALT2O43825 422 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 SRPX2O60687 465 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-206ENST00000561036 SDC3O75056 442 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 CREG1O75629 220 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 CERS1P27544 350 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 CNR2P34972 360 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 HOXD12P35452 270 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 MAGEA8P43361 318 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 GPR3P46089 330 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 SLC14A1Q13336 389 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 RGNQ15493 299 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 VMACQ2NL98 169 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 PEAR1Q5VY43 1037 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-206ENST00000561036 FRMPD2BQ6IN97 320 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 TMEM214Q6NUQ4 689 aaKnown RBP16.23■□□□□ 0.19
HDDC3-206ENST00000561036 ERMP1Q7Z2K6 904 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 ZNF551Q7Z340 670 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-206ENST00000561036 ZNF438Q7Z4V0 828 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 ZZZ3Q8IYH5 903 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 OR4N4Q8N0Y3 316 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 C10orf111Q8N326 155 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 SLC25A45Q8N413 288 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 CSNK1A1LQ8N752 337 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 ZFP28Q8NHY6 868 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 DNAJC9Q8WXX5 260 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 FIG4Q92562 907 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 FAM162AQ96A26 154 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 ZDHHC12Q96GR4 267 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 ZC3H10Q96K80 434 aaKnown RBP16.23■□□□□ 0.19
HDDC3-206ENST00000561036 ZNF184Q99676 751 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-206ENST00000561036 TRIM4Q9C037 500 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 YY1AP1Q9H869 796 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 MS4A12Q9NXJ0 267 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 PSME2Q9UL46 239 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms