RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LSM3P62310 102 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 TFAMQ00059 246 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 RELQ04864 619 aaPredicted RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 FPGSQ05932 587 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 CXCL9Q07325 125 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ZMYND11Q15326 602 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PSMD5Q16401 504 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF792Q3KQV3 632 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF404Q494X3 552 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 TFDP3Q5H9I0 405 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 LRRC8EQ6NSJ5 796 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 P2RY8Q86VZ1 359 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 BBS7Q8IWZ6 715 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PARP16Q8N5Y8 322 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 NIPA2Q8N8Q9 360 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 OR8K3Q8NH51 312 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ACER1Q8TDN7 264 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 TMEM39BQ9GZU3 492 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 DUSP15Q9H1R2 295 aaPredicted RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 HRH4Q9H3N8 390 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 MBNL1Q9NR56 388 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 MBD1Q9UIS9 605 aaPredicted RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PDE10AQ9Y233 779 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 BTBD3Q9Y2F9 522 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 MRPL11Q9Y3B7 192 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 A3GALT2U3KPV4 340 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 NRCAMQ92823 1304 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 A0A0B4J293 547 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 CGB1A6NKQ9 187 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM159BA6NKW6 160 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PPM1DO15297 605 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PTBP1P26599 531 aaKnown RBP eCLIP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 CLCN3P51790 818 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 CDH13P55290 713 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PCBP3P57721 371 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 NCS1P62166 190 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ABHD18Q0P651 414 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 IKZF1Q13422 519 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 KCNC3Q14003 757 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ACOX1Q15067 660 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 SGCBQ16585 318 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 C2CD6Q53TS8 623 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 RUNDC3AQ59EK9 446 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 TREML2Q5T2D2 321 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ADGRF1Q5T601 910 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 LRRC38Q5VT99 294 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC36A4Q6YBV0 504 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 RBPMS2Q6ZRY4 209 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC46A3Q7Z3Q1 461 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ERASQ7Z444 233 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 AQP12AQ8IXF9 295 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 TCTE3Q8IZS6 198 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 Q8N1Y9 231 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 OR10T2Q8NGX3 314 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 POMGNT1Q8WZA1 660 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ZHX1-C8orf76Q96EF9 292 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 RNF31Q96EP0 1072 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PARK7Q99497 189 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 FOXB1Q99853 325 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 DUSP23Q9BVJ7 150 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 EGLN1Q9GZT9 426 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 C11orf54Q9H0W9 315 aaPredicted RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 DEFB129Q9H1M3 183 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 SMOC2Q9H3U7 446 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PLAC1Q9HBJ0 212 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 POPDC2Q9HBU9 364 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 MYOZ2Q9NPC6 264 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 IFT46Q9NQC8 304 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PTGFRNQ9P2B2 879 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 TMEM181Q9P2C4 612 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 GMPR2Q9P2T1 348 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF639Q9UID6 485 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 TLK1Q9UKI8 766 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 MRPS7Q9Y2R9 242 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 CHTOPQ9Y3Y2 248 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 PCDHGB1Q9Y5G3 927 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ENTPD2Q9Y5L3 495 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 RBBP6Q7Z6E9 1792 aaKnown RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 SCN4AP35499 1836 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 LOC102723996A0A087X1L8 192 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 SERTM2A0A1B0GWG4 89 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 MEIOCA2RUB1 952 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 NKX2-2O95096 273 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 TGM2P21980 687 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 RPS12P25398 132 aaKnown RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 LRPAP1P30533 357 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 GZMKP49863 264 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 EPHA5P54756 1037 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 ARPP19P56211 112 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 AP1S2P56377 157 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 LILRA4P59901 499 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 PSMC5P62195 406 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 YWHAZP63104 245 aaKnown RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 DPYSL3Q14195 570 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 KCNJ11Q14654 390 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CA9Q16790 459 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 SYT16Q17RD7 645 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 BCL7AQ4VC05 210 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 PRAMEF8Q5VWM4 474 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CD276Q5ZPR3 534 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms