RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 MSI2Q96DH6 328 aaKnown RBP8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 TRIB1Q96RU8 372 aa8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 MYCBPQ99417 103 aaPredicted RBP8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 VAT1Q99536 393 aa8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 TBL1YQ9BQ87 522 aa8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 BHLHE41Q9C0J9 482 aaPredicted RBP8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 UTP6Q9NYH9 597 aaKnown RBP8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 ZNF223Q9UK11 482 aaPredicted RBP8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 MYO6Q9UM54 1294 aa8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 YARS2Q9Y2Z4 477 aaKnown RBP8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 PTGDR2Q9Y5Y4 395 aa8.53□□□□□ -1.04
PPP1R3E-204ENST00000559942 C15orf38-AP3S2A0A0A6YYH1 394 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 CCDC162PA2VCL2 907 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 H7BY64 318 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 WWP2O00308 870 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 NRDCO43847 1150 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 DLX3O60479 287 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 CST8O60676 142 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 B3GALT4O96024 378 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 TGFAP01135 160 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 SOD3P08294 240 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 RFPL3SP0C7P2 107 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 USF1P22415 310 aaPredicted RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 AOAHP28039 575 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 FOXN2P32314 431 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 CPOXP36551 454 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 PIGAP37287 484 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 LIMS1P48059 325 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 GTF2A1P52655 376 aaPredicted RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 PRDX1Q06830 199 aaKnown RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 FOXF2Q12947 444 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 FOXL1Q12952 345 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 TMED2Q15363 201 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 SF3B4Q15427 424 aaKnown RBP eCLIP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 RNF187Q5TA31 235 aaPredicted RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 NSUN5P2Q63ZY6 315 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 KCTD11Q693B1 232 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 TMEM214Q6NUQ4 689 aaKnown RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 MFSD7Q6UXD7 560 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 B3GNT7Q8NFL0 401 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 ZNF418Q8TF45 676 aaPredicted RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 SMPDL3AQ92484 453 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 NCLNQ969V3 563 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 RBMXL1Q96E39 390 aaKnown RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 FOPNLQ96NB1 174 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 PRAP1Q96NZ9 151 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 ALS2CR12Q96Q35 445 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 OR1F2PQ96R84 312 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 TSSK1BQ9BXA7 367 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 FAM53CQ9NYF3 392 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 AIPL1Q9NZN9 384 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 SPATA7Q9P0W8 599 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 LIMA1Q9UHB6 759 aaKnown RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 FEZ2Q9UHY8 353 aaPredicted RBP8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 TRHDEQ9UKU6 1024 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 PCDHA13Q9Y5I0 950 aa8.52□□□□□ -1.05
PPP1R3E-204ENST00000559942 A8MXE2 369 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 ZNF487B1APH4 448 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 F8W8V4 182 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 CHST10O43529 356 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 RGS9O75916 674 aaPredicted RBP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 P04436 131 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 CCL3P10147 92 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 JAK1P23458 1154 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 RBL1P28749 1068 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 NR2C2P49116 596 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 DIO3P55073 304 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 LGALS3BPQ08380 585 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 PDAP1Q13442 181 aaKnown RBP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 P3H1Q32P28 736 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 BEX5Q5H9J7 111 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 THEMIS2Q5TEJ8 643 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 MEI1Q5TIA1 1274 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 ITPRIPL1Q6GPH6 555 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 BZW1Q7L1Q6 419 aaKnown RBP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 NEIL3Q8TAT5 605 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 STYXQ8WUJ0 223 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 ASB11Q8WXH4 323 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 AKAP1Q92667 903 aaKnown RBP eCLIP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 P3H4Q92791 437 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 QKIQ96PU8 341 aaKnown RBP eCLIP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 RASL10BQ96S79 203 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 C19orf43Q9BQ61 176 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 CCDC77Q9BR77 488 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 AARSD1Q9BTE6 412 aaKnown RBP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 CARD6Q9BX69 1037 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 RHBGQ9H310 441 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 MANSC1Q9H8J5 431 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 NECTIN3Q9NQS3 549 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 PNO1Q9NRX1 252 aaKnown RBP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 SACM1LQ9NTJ5 587 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 SAMD15Q9P1V8 674 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 CAMK2AQ9UQM7 478 aa8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 AAR2Q9Y312 384 aaKnown RBP8.51□□□□□ -1.05
PPP1R3E-204ENST00000559942 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
PPP1R3E-204ENST00000559942 A0A087X0T9 212 aa8.5□□□□□ -1.05
PPP1R3E-204ENST00000559942 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.5□□□□□ -1.05
PPP1R3E-204ENST00000559942 TCRBV16S1A1N1A0A5B0 115 aa8.5□□□□□ -1.05
PPP1R3E-204ENST00000559942 MBD3L3A6NE82 208 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms