RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 GOLM1Q8NBJ4 401 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 MORN4Q8NDC4 146 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 SRFBP1Q8NEF9 429 aaKnown RBP8.52□□□□□ -1.05
HDDC3-204ENST00000559834 OR2L5Q8NG80 312 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 OR2M7Q8NG81 312 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 OR8K3Q8NH51 312 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 OR14A16Q8NHC5 309 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 MS4A6EQ96DS6 147 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 CFAP36Q96G28 342 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 SGCZQ96LD1 299 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 SERINC2Q96SA4 455 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 ALOXE3Q9BYJ1 711 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 ROGDIQ9GZN7 287 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 REXO4Q9GZR2 422 aaKnown RBP8.52□□□□□ -1.05
HDDC3-204ENST00000559834 ZDHHC11Q9H8X9 412 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 CNOT10Q9H9A5 744 aaKnown RBP8.52□□□□□ -1.05
HDDC3-204ENST00000559834 COPS7BQ9H9Q2 264 aaPredicted RBP8.52□□□□□ -1.05
HDDC3-204ENST00000559834 LIN28AQ9H9Z2 209 aaKnown RBP8.52□□□□□ -1.05
HDDC3-204ENST00000559834 IL1RL2Q9HB29 575 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 NPDC1Q9NQX5 325 aaPredicted RBP8.52□□□□□ -1.05
HDDC3-204ENST00000559834 DEPPQ9NTK1 212 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 GPRC5BQ9NZH0 403 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 VTI1BQ9UEU0 232 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 ZNF223Q9UK11 482 aaPredicted RBP8.52□□□□□ -1.05
HDDC3-204ENST00000559834 ACAD8Q9UKU7 415 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 PDZD2O15018 2839 aa8.52□□□□□ -1.05
HDDC3-204ENST00000559834 INTS1Q8N201 2190 aaKnown RBP8.51□□□□□ -1.05
HDDC3-204ENST00000559834 A0A0G2JN53 185 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 A0A1B0GVC2 190 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 NPEPPSL1A6NEC2 478 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 FAM166BA8MTA8 275 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 CYR61O00622 381 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 CLGNO14967 610 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 KLK8O60259 260 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SUSD5O60279 629 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 BANF1O75531 89 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 KRT38O76015 456 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 OR6B1O95007 311 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 IGHG3P01860 377 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 P04436 131 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 PPP2R1BP30154 601 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 PEX19P40855 299 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SOX3P41225 446 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 GDF5P43026 501 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 PGGT1BP53609 377 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 PLA2G16P53816 162 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SLC12A2P55011 1212 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 TFF3Q07654 80 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 MGAT5Q09328 741 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 TBL3Q12788 808 aaKnown RBP8.51□□□□□ -1.05
HDDC3-204ENST00000559834 FRG1Q14331 258 aaKnown RBP8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SLBPQ14493 270 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDDC3-204ENST00000559834 MORF4L2Q15014 288 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 HIST2H2ACQ16777 129 aaPredicted RBP8.51□□□□□ -1.05
HDDC3-204ENST00000559834 ZNF750Q32MQ0 723 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 EMC4Q5J8M3 183 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 HP1BP3Q5SSJ5 553 aaPredicted RBP8.51□□□□□ -1.05
HDDC3-204ENST00000559834 WLSQ5T9L3 541 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 HIST2H2AA3Q6FI13 130 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 B3GNT6Q6ZMB0 384 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 FAM47EQ6ZV65 393 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 CLNKQ7Z7G1 428 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 ZC3HC1Q86WB0 502 aaKnown RBP8.51□□□□□ -1.05
HDDC3-204ENST00000559834 TCAIMQ8N3R3 496 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 FAM109AQ8N4B1 249 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 FAM47BQ8NA70 645 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SLCO2A1Q92959 643 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SARAFQ96BY9 339 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 RHBDF1Q96CC6 855 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 QRFPRQ96P65 431 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 RASL10BQ96S79 203 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SMC6Q96SB8 1091 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 OSBPL9Q96SU4 736 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 TTYH2Q9BSA4 534 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 TTTY12Q9BZ98 90 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 OR8D2Q9GZM6 311 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 AICDAQ9GZX7 198 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 LDAHQ9H6V9 325 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 PRM3Q9NNZ6 103 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 PNPLA3Q9NST1 481 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SACM1LQ9NTJ5 587 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 NSMCE4AQ9NXX6 385 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SLC17A6Q9P2U8 582 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 IKZF3Q9UKT9 509 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 DAPP1Q9UN19 280 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 CLDN16Q9Y5I7 305 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 SPACA6W5XKT8 324 aa8.51□□□□□ -1.05
HDDC3-204ENST00000559834 OTOGQ6ZRI0 2925 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 FAM95CA0A1B0GW59 222 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 FAM221AA4D161 298 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 PINLYPA6NC86 204 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 TMEM200CA6NKL6 621 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 C4orf51C9J302 202 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 CES2O00748 559 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 AQP7O14520 342 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 DYRK3O43781 588 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 PRKNO60260 465 aaPredicted RBP8.5□□□□□ -1.05
HDDC3-204ENST00000559834 WDR1O75083 606 aa8.5□□□□□ -1.05
HDDC3-204ENST00000559834 GLSO94925 669 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms