RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 LGALS3BPQ08380 585 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 ZKSCAN8Q15776 578 aaPredicted RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 ACKR1Q16570 336 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SHROOM1Q2M3G4 852 aaPredicted RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 NADK2Q4G0N4 442 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 CFAP157Q5JU67 520 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SUSD4Q5VX71 490 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 PRAMEF7Q5VXH5 474 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 LYSMD4Q5XG99 296 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 FAM166AQ6J272 317 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 ZNF613Q6PF04 617 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 LINGO4Q6UY18 593 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SLC16A9Q7RTY1 509 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 ARHGAP22Q7Z5H3 698 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 GPR141Q7Z602 305 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 NUDT13Q86X67 352 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 LSMEM2Q8N112 164 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 ZCCHC7Q8N3Z6 543 aaKnown RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 ZNF383Q8NA42 475 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 THAP8Q8NA92 274 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SIDT2Q8NBJ9 832 aaKnown RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 OR56B2PQ8NGI1 322 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 OR52B4Q8NGK2 314 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 OR2T34Q8NGX1 318 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 BRSK1Q8TDC3 778 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 DQX1Q8TE96 717 aaKnown RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 RNF139Q8WU17 664 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 CCDC107Q8WV48 283 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SELENOMQ8WWX9 145 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 PGM2Q96G03 612 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 MAGED4Q96JG8 741 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 VGLL1Q99990 258 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 PIGQQ9BRB3 760 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SYT11Q9BT88 431 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 TBCDQ9BTW9 1192 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 FICDQ9BVA6 458 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 FTHL17Q9BXU8 183 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 PRRG4Q9BZD6 226 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 NMNAT2Q9BZQ4 307 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 WWTR1Q9GZV5 400 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 RAB33BQ9H082 229 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 TRPV6Q9H1D0 765 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 NCOR1P1Q9H4R4 102 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 ZDHHC6Q9H6R6 413 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 GORASP2Q9H8Y8 452 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 PELI2Q9HAT8 420 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 PALMDQ9NP74 551 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SLC7A10Q9NS82 523 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 FARSBQ9NSD9 589 aaKnown RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 NMRK1Q9NWW6 199 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 TMEM181Q9P2C4 612 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 B3GAT1Q9P2W7 334 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 LRWD1Q9UFC0 647 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 FAM153AQ9UHL3 310 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 PLA2G4CQ9UP65 541 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 KLK4Q9Y5K2 254 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 A0A1W2PRB8 838 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 HYKKA2RU49 373 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 SLC15A5A6NIM6 579 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 PRSS46E5RG02 174 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 F8VVB4 439 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 F8VWA3 439 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 NPIPA3F8WFD2 350 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 SGK1O00141 431 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CASQ2O14958 399 aaPredicted RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 CHADO15335 359 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 NUDT21O43809 227 aaKnown RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 SCO2O43819 266 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 NME2P1O60361 137 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 SNX3O60493 162 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 ATP6V1G1O75348 118 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 GAS8O95995 478 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 FRMD6-AS1P0C7T7 363 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 TOP1P11387 765 aaKnown RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 KRT3P12035 628 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CYP3A5P20815 502 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CCNCP24863 283 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 AKT2P31751 481 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 DHPSP49366 369 aaPredicted RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 NUMBP49757 651 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CCNA1P78396 465 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CCZ1BP86790 482 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CCZ1P86791 482 aaPredicted RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 CACNG1Q06432 222 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 GABPB1Q06547 395 aaPredicted RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 IL24Q13007 206 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 GPR17Q13304 367 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 GK2Q14410 553 aaPredicted RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 PDIA5Q14554 519 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 RBBP7Q16576 425 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 PM20D1Q6GTS8 502 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 ZNF770Q6IQ21 691 aaPredicted RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 CES3Q6UWW8 571 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CCBE1Q6UXH8 406 aaPredicted RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 ANKRD33Q7Z3H0 272 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 FAM114A1Q8IWE2 563 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 OTUD6BQ8N6M0 293 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 OR1J1Q8NGS3 322 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 OR10T2Q8NGX3 314 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 GRHL3Q8TE85 626 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms