RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 H0YIV9 168 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 STX16-NPEPL1H3BU86 382 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 SAP18O00422 153 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 OR7A17O14581 309 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 STX16O14662 325 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 UGDHO60701 494 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 CBX6O95503 412 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 PPP2R1BP30154 601 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 PIK3CBP42338 1070 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 ST13P50502 369 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 HSD17B7P56937 341 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 TMEM35AQ53FP2 167 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 ACER2Q5QJU3 275 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 KHDRBS2Q5VWX1 349 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 RPUSD3Q6P087 351 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 TIFABQ6ZNK6 161 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 CLNKQ7Z7G1 428 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 ZNF595Q8IYB9 648 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 FAM26EQ8N5C1 309 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 ACOT4Q8N9L9 421 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 L3MBTL4Q8NA19 623 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 ARMC2Q8NEN0 867 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 OR52B6Q8NGF0 335 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 GRHL3Q8TE85 626 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 CMTM7Q96FZ5 175 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 ZNF354BQ96LW1 612 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 NSUN5Q96P11 429 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 CDK15Q96Q40 435 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 MTERF1Q99551 399 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 MAPKAP1Q9BPZ7 522 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 MRPL57Q9BQC6 102 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 TBCDQ9BTW9 1192 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 MRPL46Q9H2W6 279 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 NOL11Q9H8H0 719 aaKnown RBP13.85□□□□□ -0.19
RPL28-208ENST00000559463 LYRM4Q9HD34 91 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 PRTFDC1Q9NRG1 225 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 TEKT2Q9UIF3 430 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 PCTPQ9UKL6 214 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 TMCO1Q9UM00 188 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 RNF11Q9Y3C5 154 aa13.85□□□□□ -0.19
RPL28-208ENST00000559463 MYO7BQ6PIF6 2116 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 RPS17P08708 135 aaKnown RBP13.84□□□□□ -0.19
RPL28-208ENST00000559463 HIST1H1TP22492 207 aaPredicted RBP13.84□□□□□ -0.19
RPL28-208ENST00000559463 PIK3CGP48736 1102 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 RPS13P62277 151 aaKnown RBP13.84□□□□□ -0.19
RPL28-208ENST00000559463 TRAF3Q13114 568 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 SLC13A2Q13183 592 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 SLC29A2Q14542 456 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 CPSF6Q16630 551 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPL28-208ENST00000559463 MEP1AQ16819 746 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 TEX35Q5T0J7 233 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 DEPDC1Q5TB30 811 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 RPS27LQ71UM5 84 aaKnown RBP13.84□□□□□ -0.19
RPL28-208ENST00000559463 SRFBP1Q8NEF9 429 aaKnown RBP13.84□□□□□ -0.19
RPL28-208ENST00000559463 WDR20Q8TBZ3 569 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 MZB1Q8WU39 189 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 MTBPQ96DY7 904 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 TAAR6Q96RI8 345 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 ZNF717Q9BY31 904 aaPredicted RBP13.84□□□□□ -0.19
RPL28-208ENST00000559463 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPL28-208ENST00000559463 ZBTB26Q9HCK0 441 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 FETUBQ9UGM5 382 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 ADGRE2Q9UHX3 823 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 MRPS33Q9Y291 106 aaKnown RBP13.84□□□□□ -0.19
RPL28-208ENST00000559463 PCDHGA11Q9Y5H2 935 aa13.84□□□□□ -0.19
RPL28-208ENST00000559463 EXPH5Q8NEV8 1989 aa13.83□□□□□ -0.19
RPL28-208ENST00000559463 A8MT66 165 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 CLDN4O14493 209 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 PLPP1O14494 284 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 PRAMEF2O60811 474 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 SMIM24O75264 130 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 MYO1DO94832 1006 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 ETHE1O95571 254 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 SSR2P43308 183 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 TUBA3CQ13748 450 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 TERF2Q15554 542 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 ZRSR2Q15696 482 aaKnown RBP13.83□□□□□ -0.2
RPL28-208ENST00000559463 INAQ16352 499 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 EIF2S3LQ2VIR3 472 aaKnown RBP13.83□□□□□ -0.2
RPL28-208ENST00000559463 TUBA3EQ6PEY2 450 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 CHSY3Q70JA7 882 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 LGI4Q8N135 537 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 SLC5A8Q8N695 610 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 EIF1ADQ8N9N8 165 aaKnown RBP13.83□□□□□ -0.2
RPL28-208ENST00000559463 APCDD1LQ8NCL9 501 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 MDS2Q8NDY4 140 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 FAR1Q8WVX9 515 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 SIGLEC12Q96PQ1 595 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 ROGDIQ9GZN7 287 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 PRM3Q9NNZ6 103 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 PNO1Q9NRX1 252 aaKnown RBP13.83□□□□□ -0.2
RPL28-208ENST00000559463 AGPAT4Q9NRZ5 378 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 ANKRD10Q9NXR5 420 aa13.83□□□□□ -0.2
RPL28-208ENST00000559463 PSMC3IPQ9P2W1 217 aaPredicted RBP13.83□□□□□ -0.2
RPL28-208ENST00000559463 ZNF223Q9UK11 482 aaPredicted RBP13.83□□□□□ -0.2
RPL28-208ENST00000559463 PPIEQ9UNP9 301 aaKnown RBP13.83□□□□□ -0.2
RPL28-208ENST00000559463 PCNX1Q96RV3 2341 aa13.82□□□□□ -0.2
RPL28-208ENST00000559463 A0A1B0GTL3 188 aa13.82□□□□□ -0.2
RPL28-208ENST00000559463 MYOCOSA0A1B0GUC4 107 aa13.82□□□□□ -0.2
RPL28-208ENST00000559463 ANKUB1A6NFN9 424 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms