RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 KCMF1Q9P0J7 381 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 POLEQ07864 2286 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 DOPEY2Q9Y3R5 2298 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 GABRR3A8MPY1 467 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 H0YIV9 168 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 PCNAP12004 261 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 CD46P15529 392 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 HIST1H1TP22492 207 aaPredicted RBP16.46■□□□□ 0.23
SMAD3-210ENST00000559092 ATP5A1P25705 553 aaKnown RBP16.46■□□□□ 0.23
SMAD3-210ENST00000559092 CERS1P27544 350 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 MLF1P58340 268 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 OR1C1Q15619 314 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 TSNAXIP1Q2TAA8 658 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 AP5B1Q2VPB7 878 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 DEPDC1Q5TB30 811 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 LGSNQ5TDP6 509 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 KHDRBS2Q5VWX1 349 aaKnown RBP16.46■□□□□ 0.23
SMAD3-210ENST00000559092 CNPY4Q8N129 248 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 ACOT4Q8N9L9 421 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 MDS2Q8NDY4 140 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 REPS1Q96D71 796 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 C5orf34Q96MH7 638 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 CENPKQ9BS16 269 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 DEFB126Q9BYW3 111 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 TRIM45Q9H8W5 580 aaPredicted RBP16.46■□□□□ 0.23
SMAD3-210ENST00000559092 ACTR8Q9H981 624 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 PSD3Q9NYI0 1048 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 ERRFI1Q9UJM3 462 aaPredicted RBP16.46■□□□□ 0.23
SMAD3-210ENST00000559092 CLDN16Q9Y5I7 305 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 SPACA6W5XKT8 324 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 SPTAN1Q13813 2472 aaKnown RBP16.46■□□□□ 0.23
SMAD3-210ENST00000559092 SCN3AQ9NY46 2000 aa16.46■□□□□ 0.23
SMAD3-210ENST00000559092 MAN1A2O60476 641 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 TGFB1P01137 390 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 ABHD2P08910 425 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 PTX3P26022 381 aaPredicted RBP16.45■□□□□ 0.22
SMAD3-210ENST00000559092 TRHRP34981 398 aaPredicted RBP16.45■□□□□ 0.22
SMAD3-210ENST00000559092 CLCN2P51788 898 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 GTF2H2Q13888 395 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 TECRLQ5HYJ1 363 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 GTF2H2CQ6P1K8 395 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 TRMT10CQ7L0Y3 403 aaKnown RBP16.45■□□□□ 0.22
SMAD3-210ENST00000559092 PLD6Q8N2A8 252 aaKnown RBP16.45■□□□□ 0.22
SMAD3-210ENST00000559092 TMEM132CQ8N3T6 1108 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 KIF2BQ8N4N8 673 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 L3MBTL4Q8NA19 623 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 FAM47BQ8NA70 645 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 APCDD1LQ8NCL9 501 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 TMEM52Q8NDY8 209 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 HUS1BQ8NHY5 278 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 DCAKDQ8WVC6 231 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 RGMAQ96B86 450 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 TRIM44Q96DX7 344 aaPredicted RBP16.45■□□□□ 0.22
SMAD3-210ENST00000559092 SCMH1Q96GD3 660 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 SIGLEC12Q96PQ1 595 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 IPPKQ9H8X2 491 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 ADAP2Q9NPF8 381 aa16.45■□□□□ 0.22
SMAD3-210ENST00000559092 A8MUA0 341 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 POC1B-GALNT4F8VUJ3 575 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 FCHO1O14526 889 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 MYO1DO94832 1006 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 LDLRP01130 860 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 STSP08842 583 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 SNRPAP09012 282 aaKnown RBP16.44■□□□□ 0.22
SMAD3-210ENST00000559092 GPR143P51810 404 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 TDGF1P3P51864 188 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 HNRNPFP52597 415 aaKnown RBP16.44■□□□□ 0.22
SMAD3-210ENST00000559092 PHEXP78562 749 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 OC90Q02509 493 aaPredicted RBP16.44■□□□□ 0.22
SMAD3-210ENST00000559092 BIKQ13323 160 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 SERTAD2Q14140 314 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 ELAVL1Q15717 326 aaKnown RBP16.44■□□□□ 0.22
SMAD3-210ENST00000559092 C4orf17Q53FE4 359 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 SPINK14Q6IE38 97 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 OR4C11Q6IEV9 310 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 ZNF793Q6ZN11 406 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 TMEM178AQ8NBL3 297 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 DAZLQ92904 295 aaKnown RBP16.44■□□□□ 0.22
SMAD3-210ENST00000559092 VMP1Q96GC9 406 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 PRM3Q9NNZ6 103 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 PNO1Q9NRX1 252 aaKnown RBP16.44■□□□□ 0.22
SMAD3-210ENST00000559092 MS4A12Q9NXJ0 267 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 LRFN1Q9P244 771 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 CPSF2Q9P2I0 782 aaKnown RBP16.44■□□□□ 0.22
SMAD3-210ENST00000559092 VTI1BQ9UEU0 232 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 NFU1Q9UMS0 254 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 OSGIN2Q9Y236 505 aa16.44■□□□□ 0.22
SMAD3-210ENST00000559092 STX16-NPEPL1H3BU86 382 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 TGFBR3LH3BV60 316 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 FOXE1O00358 373 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 STX16O14662 325 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 SMIM24O75264 130 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 NEURL1O76050 574 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 SP1P08047 785 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 TPP2P29144 1249 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 EEF1DP29692 281 aaKnown RBP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 SSR2P43308 183 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 CYB561P49447 251 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 HLCSP50747 726 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 STX4Q12846 297 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms