RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CNDP1Q96KN2 507 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 TBCDQ9BTW9 1192 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 YIPF2Q9BWQ6 316 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 NPLQ9BXD5 320 aaPredicted RBP10.76□□□□□ -0.69
SNX1-204ENST00000559061 ELOVL6Q9H5J4 265 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 BRF2Q9HAW0 419 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 SEMA3GQ9NS98 782 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 MKL2Q9ULH7 1088 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 POLHQ9Y253 713 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 ATG4BQ9Y4P1 393 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 IGHV1-45A0A0A0MS14 117 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 A0A1W2PR48 441 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 A0A1W2PS29 197 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 URADA6NGE7 173 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 ARGFXA6NJG6 315 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 BIRC5O15392 142 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 B3GALT2O43825 422 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 B4GALT2O60909 372 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 CEACAM4O75871 244 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 FAM87AP0C7U9 286 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 RNH1P13489 461 aaKnown RBP10.75□□□□□ -0.69
SNX1-204ENST00000559061 MAOAP21397 527 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 BGNP21810 368 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 PPP2R1BP30154 601 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 SSR2P43308 183 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 ARFIP1P53367 373 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 EMP2P54851 167 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 EEF1A2Q05639 463 aaKnown RBP10.75□□□□□ -0.69
SNX1-204ENST00000559061 IFT88Q13099 833 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 CHI3L2Q15782 390 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 TUBB8Q3ZCM7 444 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 C18orf63Q68DL7 685 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 QSOX2Q6ZRP7 698 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 CHSY3Q70JA7 882 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 COMMD6Q7Z4G1 85 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 TRIM46Q7Z4K8 759 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 ANKRD37Q7Z713 158 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 APLFQ8IW19 511 aaPredicted RBP10.75□□□□□ -0.69
SNX1-204ENST00000559061 ANKRD42Q8N9B4 389 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 ZSCAN1Q8NBB4 408 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 PLPP5Q8NEB5 264 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 METTL6Q8TCB7 284 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 CHTF18Q8WVB6 975 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 THAP4Q8WY91 577 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 RGMAQ96B86 450 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 ANKRD9Q96BM1 317 aaPredicted RBP10.75□□□□□ -0.69
SNX1-204ENST00000559061 ATP6V1G3Q96LB4 118 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 MAGEB10Q96LZ2 347 aaPredicted RBP10.75□□□□□ -0.69
SNX1-204ENST00000559061 SERPINI1Q99574 410 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 CLK4Q9HAZ1 481 aaKnown RBP10.75□□□□□ -0.69
SNX1-204ENST00000559061 LYRM4Q9HD34 91 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 KCNK9Q9NPC2 374 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 TEX10Q9NXF1 929 aaPredicted RBP10.75□□□□□ -0.69
SNX1-204ENST00000559061 ZDHHC2Q9UIJ5 367 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 SNX6Q9UNH7 406 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 SLC12A4Q9UP95 1085 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 MAN2B2Q9Y2E5 1009 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 STK38LQ9Y2H1 464 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 DNAJC15Q9Y5T4 150 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 CHD6Q8TD26 2715 aa10.75□□□□□ -0.69
SNX1-204ENST00000559061 TCRBV16S1A1N1A0A5B0 115 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 HEXBP07686 556 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 FGF4P08620 206 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 CD63P08962 238 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 HSD3B1P14060 373 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 HSD3B2P26439 372 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 TSFMP43897 325 aaKnown RBP10.74□□□□□ -0.69
SNX1-204ENST00000559061 POLE2P56282 527 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 NAA20P61599 178 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 CSTF3Q12996 717 aaKnown RBP10.74□□□□□ -0.69
SNX1-204ENST00000559061 SLAMF1Q13291 335 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 KIAA0040Q15053 153 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 PRSS53Q2L4Q9 553 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 MINDY4Q4G0A6 757 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 CFAP157Q5JU67 520 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 DCAF10Q5QP82 559 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 C10orf62Q5T681 223 aaPredicted RBP10.74□□□□□ -0.69
SNX1-204ENST00000559061 TTC19Q6DKK2 380 aaPredicted RBP10.74□□□□□ -0.69
SNX1-204ENST00000559061 NIPAL1Q6NVV3 410 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 BORAQ6PGQ7 559 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 RNF165Q6ZSG1 346 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 Q6ZSR9 355 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 RAB43Q86YS6 212 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 NUDCD3Q8IVD9 361 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 C1orf52Q8N6N3 182 aaKnown RBP10.74□□□□□ -0.69
SNX1-204ENST00000559061 MGARPQ8TDB4 240 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 IMMP1LQ96LU5 166 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 C3orf30Q96M34 536 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 CATSPER2Q96P56 530 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 TRMOQ9BU70 441 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 ZNF700Q9H0M5 742 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 ARGLU1Q9NWB6 273 aaPredicted RBP10.74□□□□□ -0.69
SNX1-204ENST00000559061 GIMAP2Q9UG22 337 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 HAO1Q9UJM8 370 aa10.74□□□□□ -0.69
SNX1-204ENST00000559061 MYOCOSA0A1B0GUC4 107 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 ARHGAP10A1A4S6 786 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 NPIPB8E9PQR5 432 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 ERVH48-1M5A8F1 160 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 AZIN1O14977 448 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 PROM1O43490 865 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms