RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TECRLQ5HYJ1 363 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 CRB2Q5IJ48 1285 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 GTF2H2CQ6P1K8 395 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 RELL1Q8IUW5 271 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 LURAP1LQ8IV03 231 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 PSMF1Q92530 271 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 ZBTB9Q96C00 473 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SMIM10Q96HG1 83 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 IMMP1LQ96LU5 166 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 OR1F2PQ96R84 312 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 LPAR4Q99677 370 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 NOL11Q9H8H0 719 aaKnown RBP11.27□□□□□ -0.61
TPM1-216ENST00000558910 IPPKQ9H8X2 491 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SEMA4BQ9NPR2 832 aaPredicted RBP11.27□□□□□ -0.61
TPM1-216ENST00000558910 KLHL1Q9NR64 748 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 PRTFDC1Q9NRG1 225 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 STMN3Q9NZ72 180 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPM1-216ENST00000558910 RNF11Q9Y3C5 154 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 HRH3Q9Y5N1 445 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.61
TPM1-216ENST00000558910 MAGEB17A8MXT2 336 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 TCP11X1B4DZS4 312 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 PRKRAO75569 313 aaKnown RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 CLEC3AO75596 197 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 MYO1DO94832 1006 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 TBX6O95947 436 aaPredicted RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 IFNA16P05015 189 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 GCAP28676 217 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 SSR2P43308 183 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 CCNG1P51959 295 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 ALDH18A1P54886 795 aaKnown RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 LIM2P55344 173 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 RPS13P62277 151 aaKnown RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 OC90Q02509 493 aaPredicted RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 CDKL4Q5MAI5 379 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 TTC19Q6DKK2 380 aaPredicted RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 ABHD17CQ6PCB6 329 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 ZNF793Q6ZN11 406 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 RIPOR1Q6ZS17 1223 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 Q6ZS92 163 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 CRLF3Q8IUI8 442 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 OR4N5Q8IXE1 308 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 BEST3Q8N1M1 668 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 PLPP5Q8NEB5 264 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 OR2L5Q8NG80 312 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 OR7G3Q8NG95 312 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 HUS1BQ8NHY5 278 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 RHEBL1Q8TAI7 183 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 ZNF473Q8WTR7 871 aaKnown RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 UBTD2Q8WUN7 234 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 ZNF837Q96EG3 531 aaPredicted RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 MAPKAP1Q9BPZ7 522 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 CDCP1Q9H5V8 836 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 LIN28AQ9H9Z2 209 aaKnown RBP11.26□□□□□ -0.61
TPM1-216ENST00000558910 HECTD1Q9ULT8 2610 aa11.26□□□□□ -0.61
TPM1-216ENST00000558910 NUP210LQ5VU65 1888 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 A0A088AWK7 358 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 LDB3O75112 727 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 GBAP04062 536 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 SHBGP04278 402 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 RBP1P09455 135 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 ICAM2P13598 275 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 TNNI3P19429 210 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 ZNF10P21506 573 aaPredicted RBP11.25□□□□□ -0.61
TPM1-216ENST00000558910 MTTPP55157 894 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 CDH13P55290 713 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 RAB38P57729 211 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 SLC26A5P58743 744 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 PMP22Q01453 160 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 TGM3Q08188 693 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 TLR1Q15399 786 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 AP5B1Q2VPB7 878 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 LGSNQ5TDP6 509 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 GRHL2Q6ISB3 625 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 IGFL3Q6UXB1 125 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 TRMT10CQ7L0Y3 403 aaKnown RBP11.25□□□□□ -0.61
TPM1-216ENST00000558910 UBE3DQ7Z6J8 389 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 HPS6Q86YV9 775 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 OR52B6Q8NGF0 335 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 GRHL3Q8TE85 626 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 PPP4R1Q8TF05 950 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 UBE2E3Q969T4 207 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 QRFPRQ96P65 431 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 SERINC2Q96SA4 455 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 MS4A8Q9BY19 250 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 HES7Q9BYE0 225 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 SLC29A3Q9BZD2 475 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 EHD1Q9H4M9 534 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 NT5DC2Q9H857 520 aa11.25□□□□□ -0.61
TPM1-216ENST00000558910 TRBV11-1A0A0K0K1C0 115 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 TGFBR3LH3BV60 316 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 PPP6CO00743 305 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 OR7A17O14581 309 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 AGFG2O95081 481 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 IL10P22301 178 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 CPN2P22792 545 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 ATP5A1P25705 553 aaKnown RBP11.24□□□□□ -0.61
TPM1-216ENST00000558910 TAS2R50P59544 299 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 STX4Q12846 297 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms