RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 TSLPQ969D9 159 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 PTCHD1Q96NR3 888 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 SLC29A3Q9BZD2 475 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 SLC25A18Q9H1K4 315 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF160Q9HCG1 818 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 LYRM4Q9HD34 91 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 MID1IP1Q9NPA3 183 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF71Q9NQZ8 489 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 FARSBQ9NSD9 589 aaKnown RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 GPR83Q9NYM4 423 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 DAPP1Q9UN19 280 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 MRPS33Q9Y291 106 aaKnown RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 TP53TG5Q9Y2B4 290 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 IGHV3-20A0A0C4DH32 117 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 A0A1W2PQ72 361 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 MANBAO00462 879 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 CEACAM4O75871 244 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 SEMA3DO95025 777 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 SCELO95171 688 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 KRT6AP02538 564 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 KRT6BP04259 564 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 MAOAP21397 527 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 ALDH3A1P30838 453 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 BSGP35613 385 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 KRT6CP48668 564 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 ARFIP1P53367 373 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 SLAMF1Q13291 335 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 CASP8Q14790 479 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 PCOLCEQ15113 449 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 LACTB2Q53H82 288 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-205ENST00000558428 TNFAIP8L3Q5GJ75 292 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 TCTN3Q6NUS6 607 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 PGM2Q96G03 612 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 KCNA7Q96RP8 456 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 CSF3RQ99062 836 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 HBEGFQ99075 208 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 MAPKAP1Q9BPZ7 522 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 MECRQ9BV79 373 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 NUDT9Q9BW91 350 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 GATA5Q9BWX5 397 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF700Q9H0M5 742 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 BRF2Q9HAW0 419 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 RIC8BQ9NVN3 520 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 FBXW2Q9UKT8 454 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 SLC12A4Q9UP95 1085 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 MMACHCQ9Y4U1 282 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 TIMM22Q9Y584 194 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 PCDHGA9Q9Y5G4 932 aaKnown RBP11.62□□□□□ -0.55
SMAD3-205ENST00000558428 ACTL7BQ9Y614 415 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 SPACA6W5XKT8 324 aa11.62□□□□□ -0.55
SMAD3-205ENST00000558428 GOLGA6L10A6NI86 522 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 H3BQF6 201 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 CYR61O00622 381 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 CLDN4O14493 209 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 UBFD1O14562 309 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 ULK1O75385 1050 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 EEDO75530 441 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 CRCPO75575 148 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 SEC24DO94855 1032 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 NR1D1P20393 614 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 CPN2P22792 545 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 HTR6P50406 440 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 PGDP52209 483 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 HNRNPFP52597 415 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 OR4D2P58180 307 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 ACTN3Q08043 901 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 Q0VFX4 171 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 NFATC3Q12968 1075 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 SLC13A2Q13183 592 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 MYBPC3Q14896 1274 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 SFT2D3Q587I9 215 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 IRAK1BP1Q5VVH5 260 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 CYP20A1Q6UW02 462 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 NUDT13Q86X67 352 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF595Q8IYB9 648 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 ZCCHC7Q8N3Z6 543 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 TMEM52Q8NDY8 209 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 SREK1Q8WXA9 508 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 THOC3Q96J01 351 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 TUBB6Q9BUF5 446 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF717Q9BY31 904 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 MRPL1Q9BYD6 325 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 SHCBP1LQ9BZQ2 653 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 STMN4Q9H169 189 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 DDX31Q9H8H2 851 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 SSU72Q9NP77 194 aaKnown RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 KCNK9Q9NPC2 374 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 NECTIN3Q9NQS3 549 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 PRTFDC1Q9NRG1 225 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 ARGLU1Q9NWB6 273 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-205ENST00000558428 AHSPQ9NZD4 102 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 KCMF1Q9P0J7 381 aa11.61□□□□□ -0.55
SMAD3-205ENST00000558428 CROCCQ5TZA2 2017 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 IGKV3D-11A0A0A0MRZ8 115 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 A0A0A6YYD5 115 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 K7EM74 188 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 KLHL41O60662 606 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 GBAP04062 536 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms