RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 SERPINB8P50452 374 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 CLCN2P51788 898 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 HSD17B7P56937 341 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 MLF1P58340 268 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 ALDH6A1Q02252 535 aaKnown RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 ID2Q02363 134 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 TBCCQ15814 346 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 PFKFB4Q16877 469 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 FAM83EQ2M2I3 478 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 SLC25A25Q6KCM7 469 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 ZNF793Q6ZN11 406 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 UBE3DQ7Z6J8 389 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 ZNF595Q8IYB9 648 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 HORMAD2Q8N7B1 307 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 FAM98AQ8NCA5 519 aaKnown RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 APCDD1LQ8NCL9 501 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 ZNF473Q8WTR7 871 aaKnown RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 IFT81Q8WYA0 676 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 UBE2E3Q969T4 207 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 NCLNQ969V3 563 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 FRMD6Q96NE9 622 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 KCNC2Q96PR1 638 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 SORBS1Q9BX66 1292 aaKnown RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 OR51B5Q9H339 312 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 CDC42EP4Q9H3Q1 356 aaKnown RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 ADAP2Q9NPF8 381 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 PRDM7Q9NQW5 492 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 CPSF2Q9P2I0 782 aaKnown RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 DMGDHQ9UI17 866 aaKnown RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 ZNF223Q9UK11 482 aaPredicted RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 NPIPA1Q9UND3 350 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 CLDN16Q9Y5I7 305 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 SPTAN1Q13813 2472 aaKnown RBP11.13□□□□□ -0.63
HERC1-202ENST00000558324 HIVEP3Q5T1R4 2406 aa11.13□□□□□ -0.63
HERC1-202ENST00000558324 ICE1Q9Y2F5 2266 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 CNTRLQ7Z7A1 2325 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 CYR61O00622 381 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 LDB3O75112 727 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 ALDOAP04075 364 aaKnown RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 ATP5A1P25705 553 aaKnown RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 DCTP40126 519 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 ARL1P40616 181 aaPredicted RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 HLCSP50747 726 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 RAP1GDS1P52306 607 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 RBPJQ06330 500 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 STX4Q12846 297 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 RCN2Q14257 317 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 SETDB1Q15047 1291 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 ZRSR2Q15696 482 aaKnown RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 GRHL2Q6ISB3 625 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 KLC3Q6P597 504 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 C16orf47Q6ZP98 133 aaPredicted RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 LAS2Q8IYD9 372 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 TMEM156Q8N614 296 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 CPSF7Q8N684 471 aaKnown RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 ACOT4Q8N9L9 421 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 OR7G3Q8NG95 312 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 UHMK1Q8TAS1 419 aaKnown RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 TMEM125Q96AQ2 219 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 MAGED4Q96JG8 741 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 MTERF1Q99551 399 aaKnown RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 MAPKAP1Q9BPZ7 522 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 ACSS3Q9H6R3 686 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 ACTR8Q9H981 624 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 LIN28AQ9H9Z2 209 aaKnown RBP11.12□□□□□ -0.63
HERC1-202ENST00000558324 PCDHGB6Q9Y5F9 930 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 MAST4O15021 2626 aa11.12□□□□□ -0.63
HERC1-202ENST00000558324 NBPF19A0A087WUL8 3843 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 CCL21O00585 134 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 ZNHIT1O43257 154 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 PRKNO60260 465 aaPredicted RBP11.11□□□□□ -0.63
HERC1-202ENST00000558324 NME2P1O60361 137 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 SLC19A2O60779 497 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 CTNSO60931 367 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 ITGA10O75578 1167 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 KLHL2O95198 593 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 SIX3O95343 332 aaPredicted RBP11.11□□□□□ -0.63
HERC1-202ENST00000558324 INHBAP08476 426 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 ZNF24P17028 368 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 TNNI3P19429 210 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 NME2P22392 152 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 HIST1H1TP22492 207 aaPredicted RBP11.11□□□□□ -0.63
HERC1-202ENST00000558324 RFC3P40938 356 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 CASP2P42575 452 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 HSF1Q00613 529 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 E2F2Q14209 437 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 NAA30Q147X3 362 aaPredicted RBP11.11□□□□□ -0.63
HERC1-202ENST00000558324 ACAP2Q15057 778 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 TERF2Q15554 542 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 ELAVL1Q15717 326 aaKnown RBP11.11□□□□□ -0.63
HERC1-202ENST00000558324 AP5B1Q2VPB7 878 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 TMEM35AQ53FP2 167 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 KHDRBS2Q5VWX1 349 aaKnown RBP11.11□□□□□ -0.63
HERC1-202ENST00000558324 CEP128Q6ZU80 1094 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 CHSY3Q70JA7 882 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 CCDC91Q7Z6B0 441 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 ZNF227Q86WZ6 799 aa11.11□□□□□ -0.63
HERC1-202ENST00000558324 CYP4Z2PQ8N1L4 340 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms