RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 GABRQQ9UN88 632 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 EXO1Q9UQ84 846 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 PPIL1Q9Y3C6 166 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 HYKKA2RU49 373 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 ADAP00813 363 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 C1SP09871 688 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF8P17098 575 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 ITGB7P26010 798 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 RPL3P39023 403 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 SPINT3P49223 89 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 RPS13P62277 151 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 DAB2P98082 770 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 CHRNEQ04844 493 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM131AQ6UXB0 335 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 NOXA1Q86UR1 476 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM181AQ8N9Y4 354 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 MMP28Q9H239 520 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 TMEM245Q9H330 911 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 NDUFB11Q9NX14 153 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 STOX2Q9P2F5 926 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 RHCGQ9UBD6 479 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 CLEC2DQ9UHP7 191 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 TMCC3Q9ULS5 477 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 RPL36Q9Y3U8 105 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 MAU2Q9Y6X3 613 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 DSPPQ9NZW4 1301 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 CENPFP49454 3210 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 MANSC4A6NHS7 340 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 BNIP3LO60238 219 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 GPR37L1O60883 481 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 MTX2O75431 263 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 CYP17A1P05093 508 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 ARAFP10398 606 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 OSMP13725 252 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PCBP3P57721 371 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 HYAL2Q12891 473 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 C1DQ13901 141 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 GPAT3Q53EU6 434 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 TMEM201Q5SNT2 666 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF770Q6IQ21 691 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 XKRXQ6PP77 449 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC30A8Q8IWU4 369 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 LAS2Q8IYD9 372 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 VWA5B2Q8N398 1253 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 BCL7CQ8WUZ0 217 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PPCDCQ96CD2 204 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 ECHDC3Q96DC8 303 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 TRMT2BQ96GJ1 504 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 ZFYVE19Q96K21 471 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 OR4K3Q96R72 315 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 GDF15Q99988 308 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 TMEM175Q9BSA9 504 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 UCK2Q9BZX2 261 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 POLR2J2Q9GZM3 115 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 DNAJC27Q9NZQ0 273 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM8A1Q9UBU6 413 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 CD84Q9UIB8 345 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 LRFN2Q9ULH4 789 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PCM1Q15154 2024 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 NINQ8N4C6 2090 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 TNFRSF10AO00220 468 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PSIP1O75475 530 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 SLCO2B1O94956 709 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PRKCAP17252 672 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 DGKEP52429 567 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PNLIPRP1P54315 467 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 LMAN2Q12907 356 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 VEPH1Q14D04 833 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC5A12Q1EHB4 618 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 GLYR1Q49A26 553 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 MED27Q6P2C8 311 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 CASP12Q6UXS9 341 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 KLHDC8AQ8IYD2 350 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 RDH10Q8IZV5 341 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 NANOGP1Q8N7R0 232 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 GDPD1Q8N9F7 314 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PROKR2Q8NFJ6 384 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 OR5AK3PQ8NH89 298 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 CIDECQ96AQ7 238 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 REPS1Q96D71 796 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 TRMT61AQ96FX7 289 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 RNF170Q96K19 258 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 RC3H2Q9HBD1 1191 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 TRIM39Q9HCM9 518 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 PLSCR3Q9NRY6 295 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 GULP1Q9UBP9 304 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 KCND3Q9UK17 655 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF197O14709 1029 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 MYL12BO14950 172 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 GREM1O60565 184 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 TPST2O60704 377 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 AP2A2O94973 939 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 CDRT1O95170 752 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 CATP04040 527 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms