RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ALG3Q92685 438 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 TSLPQ969D9 159 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 FOPNLQ96NB1 174 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PANX3Q96QZ0 392 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 OLFM1Q99784 485 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 MACROD1Q9BQ69 325 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 ADAM19Q9H013 955 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 P2RY12Q9H244 342 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 LIME1Q9H400 295 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CDCP1Q9H5V8 836 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 KCNJ16Q9NPI9 418 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 DMRT3Q9NQL9 472 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CATSPERZQ9NTU4 200 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 MRGBPQ9NV56 204 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 WHRNQ9P202 907 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 LRFN1Q9P244 771 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 C19orf25Q9UFG5 118 aaPredicted RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 KCNN3Q9UGI6 736 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 RIMKLBQ9ULI2 386 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 RPH3AQ9Y2J0 694 aaPredicted RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 HCFC1P51610 2035 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 SYCE3A1L190 88 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 H0YIG0 161 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 GOLGA6L19H0YKK7 550 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 SGK494L7N484 410 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 MYO1CO00159 1063 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TXNDC9O14530 226 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 NDC80O14777 642 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TFECO14948 347 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 KPNA5O15131 536 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 PSMD3O43242 534 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 B3GALT2O43825 422 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 HS6ST1O60243 411 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CDC40O60508 579 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 RDH16O75452 317 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CLEC3AO75596 197 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CDC123O75794 336 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ZNF189O75820 626 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 SLITRK5O94991 958 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TJP3O95049 919 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 INMTO95050 263 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 KCNH1O95259 989 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CCNDBP1O95273 360 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 NSA2O95478 260 aaKnown RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 GAS8O95995 478 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TPM3P06753 285 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 PKMP14618 531 aaKnown RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 FSTP19883 344 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 RPS3P23396 243 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 GRK2P25098 689 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ADRA1DP25100 572 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TPP2P29144 1249 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 HOXC12P31275 282 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 BCL6P41182 706 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 MAGEA1P43355 309 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CYB561P49447 251 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TTPAP49638 278 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 AGTR2P50052 363 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 MEOX1P50221 254 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 NR0B1P51843 470 aaKnown RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 EIF3BP55884 814 aaKnown RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ARL4CP56559 192 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 SLC26A5P58743 744 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TAS2R50P59544 299 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 PLIN5Q00G26 463 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 RHAGQ02094 409 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 RELAQ04206 551 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 FOLH1Q04609 750 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 GABPB1Q06547 395 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ACTN3Q08043 901 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 PMPCAQ10713 525 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 USP10Q14694 798 aaKnown RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 NSDHLQ15738 373 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ANKRD20A4Q4UJ75 823 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CMPK2Q5EBM0 449 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 EMC4Q5J8M3 183 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 FAM209BQ5JX69 171 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CES4AQ5XG92 561 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 GTF2IRD2BQ6EKJ0 949 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TMEM211Q6ICI0 200 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 PPP1R21Q6ZMI0 780 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ACAD11Q709F0 780 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 VN1R4Q7Z5H5 301 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 GTF2IRD2Q86UP8 949 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 RPS19BP1Q86WX3 136 aaKnown RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 PDSS2Q86YH6 399 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CMIPQ8IY22 773 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 LGI4Q8N135 537 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ARMC10Q8N2F6 343 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 KIF2BQ8N4N8 673 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 PPFIBP2Q8ND30 876 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 FAM13CQ8NE31 585 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ELP5Q8TE02 316 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ZNF480Q8WV37 535 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 LRTOMTQ8WZ04 291 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 RND1Q92730 232 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 FAM136AQ96C01 138 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 VMP1Q96GC9 406 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TMEM41AQ96HV5 264 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 RCC1LQ96I51 464 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms