RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ABCF3Q9NUQ8 709 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 ANKRD10Q9NXR5 420 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 TAS2R13Q9NYV9 303 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 TRMT6Q9UJA5 497 aaKnown RBP8.1□□□□□ -1.11
VRK1-206ENST00000557222 ZFP69BQ9UJL9 534 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 ITGB1BP2Q9UKP3 347 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 FBXO5Q9UKT4 447 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 PPIEQ9UNP9 301 aaKnown RBP8.1□□□□□ -1.11
VRK1-206ENST00000557222 ANKHD1Q8IWZ3 2542 aaKnown RBP8.09□□□□□ -1.11
VRK1-206ENST00000557222 ABCA4P78363 2273 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 IGKV3D-11A0A0A0MRZ8 115 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 TCRBV16S1A1N1A0A5B0 115 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 FEZF1A0PJY2 475 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 OR2W5A6NFC9 320 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 USP27XA6NNY8 438 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 GOLGA6L6A8MZA4 724 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 NDUFS4O43181 175 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 HAUS5O94927 633 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 CDH1P12830 882 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 CHRNB4P30926 498 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 GPS1Q13098 491 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 ARHGAP11AQ6P4F7 1023 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 RGS9BPQ6ZS82 235 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 FGD2Q7Z6J4 655 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 GALNT7Q86SF2 657 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 ZNF227Q86WZ6 799 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 GPALPP1Q8IXQ4 340 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 MYO1HQ8N1T3 1032 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 ZFP62Q8NB50 900 aaPredicted RBP8.09□□□□□ -1.11
VRK1-206ENST00000557222 ZNF740Q8NDX6 193 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 NFAM1Q8NET5 270 aaPredicted RBP8.09□□□□□ -1.11
VRK1-206ENST00000557222 TRPV3Q8NET8 790 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 TRIM58Q8NG06 486 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 EEF1AKMT1Q8WVE0 214 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 TSLPQ969D9 159 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 SDCCAG3Q96C92 435 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 SNF8Q96H20 258 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 SIGLEC10Q96LC7 697 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 PTCHD1Q96NR3 888 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 SERPINB12Q96P63 405 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 TRIM54Q9BYV2 358 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 DEFB126Q9BYW3 111 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 TP63Q9H3D4 680 aaPredicted RBP8.09□□□□□ -1.11
VRK1-206ENST00000557222 C20orf96Q9NUD7 363 aaPredicted RBP8.09□□□□□ -1.11
VRK1-206ENST00000557222 PPT2Q9UMR5 302 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 MMACHCQ9Y4U1 282 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 MAD1L1Q9Y6D9 718 aa8.09□□□□□ -1.11
VRK1-206ENST00000557222 ABCA2Q9BZC7 2435 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 FAM221AA4D161 298 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 PABPN1LA6NDY0 278 aaKnown RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 PSMD12O00232 456 aaPredicted RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 TFECO14948 347 aaPredicted RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 OR1F1O43749 312 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 CEP104O60308 925 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 CDC123O75794 336 aaPredicted RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 TTC4O95801 387 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 KRT14P02533 472 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 STATHP02808 62 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 ENO2P09104 434 aaPredicted RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 SMIM10L1P0DMW3 83 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 RNH1P13489 461 aaKnown RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 TFEBP19484 476 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 PTGER1P34995 402 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 CLCN2P51788 898 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 ITGA8P53708 1063 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 KRTAP10-9P60411 292 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 TIAL1Q01085 375 aaKnown RBP eCLIP8.08□□□□□ -1.12
VRK1-206ENST00000557222 CSHL1Q14406 222 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 DEFB134Q4QY38 66 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 ANKRD22Q5VYY1 191 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 CPSF7Q8N684 471 aaKnown RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 B3GNT7Q8NFL0 401 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 OR5T3Q8NGG3 340 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 UTP15Q8TED0 518 aaKnown RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 RND1Q92730 232 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 FBXL8Q96CD0 374 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 PDLIM5Q96HC4 596 aaKnown RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 SMIM10Q96HG1 83 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 SEC16BQ96JE7 1060 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 NAT9Q9BTE0 207 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 NPLQ9BXD5 320 aaPredicted RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 ATG10Q9H0Y0 220 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 PELI2Q9HAT8 420 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 TNFRSF10DQ9UBN6 386 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 KCNN3Q9UGI6 736 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 ADAMTS6Q9UKP5 1117 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 CORO1CQ9ULV4 474 aaPredicted RBP8.08□□□□□ -1.12
VRK1-206ENST00000557222 SH2B3Q9UQQ2 575 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 ZNF407Q9C0G0 2248 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 AKAP6Q13023 2319 aa8.08□□□□□ -1.12
VRK1-206ENST00000557222 ACANP16112 2415 aa8.07□□□□□ -1.12
VRK1-206ENST00000557222 A0A1B0GTH9 108 aa8.07□□□□□ -1.12
VRK1-206ENST00000557222 ZNF860A6NHJ4 632 aa8.07□□□□□ -1.12
VRK1-206ENST00000557222 PEX1O43933 1283 aa8.07□□□□□ -1.12
VRK1-206ENST00000557222 B4GALT2O60909 372 aa8.07□□□□□ -1.12
VRK1-206ENST00000557222 KRT38O76015 456 aa8.07□□□□□ -1.12
VRK1-206ENST00000557222 SERPINA6P08185 405 aa8.07□□□□□ -1.12
VRK1-206ENST00000557222 HOXD4P09016 255 aaPredicted RBP8.07□□□□□ -1.12
VRK1-206ENST00000557222 ZNF888P0CJ79 500 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms