RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 HIST1H2AHQ96KK5 128 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 OR2A5Q96R48 311 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 HIST1H2AJQ99878 128 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 VRK1Q99986 396 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 H2AFJQ9BTM1 129 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 SORBS1Q9BX66 1292 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 PCBD2Q9H0N5 130 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 ZNF552Q9H707 407 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 CNTD2Q9H8S5 307 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 PARVBQ9HBI1 364 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 OBP2BQ9NPH6 170 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 SLAMF7Q9NQ25 335 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 TMEM184CQ9NVA4 438 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 TAC3Q9UHF0 121 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 CORO1CQ9ULV4 474 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 VPS4AQ9UN37 437 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 PCSK5Q92824 1860 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 KCNE1BA0A087WTH5 132 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 CLEC18AA5D8T8 446 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 USP27XA6NNY8 438 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 NOTOA8MTQ0 251 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 SOCS6O14544 535 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 NDC80O14777 642 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 PCDH17O14917 1159 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 SEC24DO94855 1032 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 F7P08709 466 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 GABRB3P28472 473 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 IMPA1P29218 277 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 ITGA8P53708 1063 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 TIAL1Q01085 375 aaKnown RBP eCLIP9.31□□□□□ -0.924e-16■■■□□ 15.3
HNRNPC-228ENST00000557033 SP140Q13342 867 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 TSTA3Q13630 321 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 FAM53BQ14153 422 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 FRG1Q14331 258 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 COLEC12Q5KU26 742 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 TEDDM1Q5T9Z0 273 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 BICRALQ6AI39 1079 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 FAM180BQ6P0A1 224 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 PAQR3Q6TCH7 311 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 KIRREL2Q6UWL6 708 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 CLEC18BQ6UXF7 455 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 PIWIL4Q7Z3Z4 852 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 IGDCC3Q8IVU1 814 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 KLHL7Q8IXQ5 586 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 CSNK1A1LQ8N752 337 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 ANKS4BQ8N8V4 417 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 CLEC18CQ8NCF0 446 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 PPFIBP2Q8ND30 876 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 STT3BQ8TCJ2 826 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 EEF1AKMT1Q8WVE0 214 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 HOXB13Q92826 284 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 MIEF2Q96C03 454 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 CABS1Q96KC9 395 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 CAPZA3Q96KX2 299 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 NDNQ99608 321 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 NAPGQ99747 312 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 FAM129AQ9BZQ8 928 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 PPANQ9NQ55 473 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 CCDC177Q9NQR7 707 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 GALNT8Q9NY28 637 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 B3GNT3Q9Y2A9 372 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 VWA7Q9Y334 891 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 HS3ST3B1Q9Y662 390 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 TEX264Q9Y6I9 313 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 MAU2Q9Y6X3 613 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 MYO18BQ8IUG5 2567 aa9.31□□□□□ -0.92
HNRNPC-228ENST00000557033 SPTA1P02549 2419 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 MED26O95402 600 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 CAPN3P20807 821 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 FBLP22087 321 aaKnown RBP9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 SERPINF1P36955 418 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 SLC26A3P40879 764 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 ELK3P41970 407 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 NRG3P56975 720 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 FOXL2P58012 376 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 KLC1Q07866 573 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 ILF2Q12905 390 aaKnown RBP9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 INPP5JQ15735 1006 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 RBBP7Q16576 425 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 NDUFA9Q16795 377 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 PLEKHN1Q494U1 663 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 AGAP7PQ5VUJ5 663 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 IRAK1BP1Q5VVH5 260 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 CD276Q5ZPR3 534 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 ATG9BQ674R7 924 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 ADCK2Q7Z695 626 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 TMEM151BQ8IW70 566 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 GLB1L2Q8IW92 636 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 ZADH2Q8N4Q0 377 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 FAM26EQ8N5C1 309 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 METTL27Q8N6F8 245 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 Q8NA96 180 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 BBOF1Q8ND07 529 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 ERP27Q96DN0 273 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 SNF8Q96H20 258 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 PDLIM5Q96HC4 596 aaKnown RBP9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 C10orf90Q96M02 699 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 PRAP1Q96NZ9 151 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 AGAP4Q96P64 663 aa9.3□□□□□ -0.92
HNRNPC-228ENST00000557033 TRIM54Q9BYV2 358 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms