RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CES3Q6UWW8 571 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 C9orf47Q6ZRZ4 202 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 NEK10Q6ZWH5 1172 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 BNIPLQ7Z465 357 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 MDGA2Q7Z553 956 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 GALNT7Q86SF2 657 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 ANKRD23Q86SG2 305 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 CPOQ8IVL8 374 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 TBC1D21Q8IYX1 336 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 CENPLQ8N0S6 344 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 DEFB106AQ8N104 65 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 TTC30BQ8N4P2 665 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 DHRSXQ8N5I4 330 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 MINDY1Q8N5J2 469 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 RNF148Q8N7C7 305 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 C12orf29Q8N999 325 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 EXD3Q8N9H8 876 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 SPPL2BQ8TCT7 592 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 RAB2BQ8WUD1 216 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 CHPT1Q8WUD6 406 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 KCTD4Q8WVF5 259 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 SNRNP27Q8WVK2 155 aaKnown RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 TRUB1Q8WWH5 349 aaKnown RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 NT5C3BQ969T7 300 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 FAM149B1Q96BN6 582 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 ATXN7L3BQ96GX2 97 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 ZNF419Q96HQ0 510 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 PLEKHA8Q96JA3 519 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 TBATAQ96M53 351 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 ZMAT2Q96NC0 199 aaKnown RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 TSGA13Q96PP4 275 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 NPY6RQ99463 290 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 CIB1Q99828 191 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 TBL1YQ9BQ87 522 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 BCL7BQ9BQE9 202 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 MRPL45Q9BRJ2 306 aaKnown RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 TDRD1Q9BXT4 1180 aaKnown RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 PAIP1Q9H074 479 aaKnown RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 SEMA6AQ9H2E6 1030 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 ABHD16BQ9H3Z7 469 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 CAB39LQ9H9S4 337 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 CXorf21Q9HAI6 301 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 PFDN4Q9NQP4 134 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 AGPAT4Q9NRZ5 378 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 FAM49BQ9NUQ9 324 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 INTS10Q9NVR2 710 aaKnown RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 DUS2Q9NX74 493 aaKnown RBP4.54□□□□□ -1.68
ATXN3-246ENST00000557030 ARHGEF38Q9NXL2 777 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 NDUFAF4Q9P032 175 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 ACTR3BQ9P1U1 418 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 RCE1Q9Y256 329 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 TMED5Q9Y3A6 229 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 ZNF711Q9Y462 761 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 FADS3Q9Y5Q0 445 aa4.54□□□□□ -1.68
ATXN3-246ENST00000557030 CCL15-CCL14A0A0B4J2E2 113 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 FUOMA2VDF0 154 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PRORSD1PA6NEY8 169 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 FAM90A20PA6NIJ5 464 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CD8B2A6NJW9 211 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SAC3D1A6NKF1 404 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 A6NNC1 897 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 H3BMQ9 156 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 STX16-NPEPL1H3BU86 382 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 KCNK1O00180 336 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 FBP2O00757 339 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ANGPT2O15123 496 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 HCRTO43612 131 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TULP3O75386 442 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 E2F6O75461 281 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SUPT3HO75486 399 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SERPINB7O75635 380 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TIPRLO75663 272 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 NDUFB8O95169 186 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CSPG5O95196 566 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 EPN2O95208 641 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CPNE6O95741 557 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 BCL10O95999 233 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PGK1P00558 417 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 NPPAP01160 153 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ALOX5P09917 674 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 HOXB6P17509 224 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ERCC2P18074 760 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CCNA2P20248 432 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CDH3P22223 829 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ADORA2BP29275 332 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 GNL1P36915 607 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PCP4P48539 62 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 MRPL19P49406 292 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 BCAP31P51572 246 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SLC7A2P52569 658 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PRAMEP78395 509 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CCNA1P78396 465 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 RELAQ04206 551 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 GALNT2Q10471 571 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 GRIK2Q13002 908 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 INPP5JQ15735 1006 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SMAD1Q15797 465 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CCL15Q16663 113 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 RGS21Q2M5E4 152 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms