RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 LCMT2O60294 686 aaKnown RBP13.26□□□□□ -0.29
SHMT2-226ENST00000556825 IFNGP01579 166 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 MRPL19P49406 292 aaKnown RBP13.26□□□□□ -0.29
SHMT2-226ENST00000556825 STARD6P59095 220 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 MLLT1Q03111 559 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-226ENST00000556825 MARCH8Q5T0T0 291 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 SNX33Q8WV41 574 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 BRI3BPQ8WY22 251 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 MRPL38Q96DV4 380 aaKnown RBP13.26□□□□□ -0.29
SHMT2-226ENST00000556825 MEGF10Q96KG7 1140 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 DMRTA2Q96SC8 542 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 C2orf88Q9BSF0 95 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 YIPF4Q9BSR8 244 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 RHOJQ9H4E5 214 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 AMBNQ9NP70 447 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 GPR83Q9NYM4 423 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 WRAP73Q9P2S5 460 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-226ENST00000556825 NRXN2Q9P2S2 1712 aa13.26□□□□□ -0.29
SHMT2-226ENST00000556825 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 A8MT66 165 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 WASH3PC4AMC7 463 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 F5H423 210 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 RTCAO00442 366 aaKnown RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 CD3EAPO15446 510 aaKnown RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 BEST1O76090 585 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MOCS2O96007 188 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 PGK1P00558 417 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 HPP00738 406 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MATKP42679 507 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 DCDP81605 110 aaKnown RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 DHODHQ02127 395 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 ST3GAL4Q11206 333 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MADCAM1Q13477 382 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 RAB33AQ14088 237 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MED22Q15528 200 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 CDNFQ49AH0 187 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 FAM219BQ5XKK7 198 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 GPAT2Q6NUI2 795 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 PLBD1Q6P4A8 553 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 ALKAL2Q6UX46 152 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 CIR1Q86X95 450 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 CBLN2Q8IUK8 224 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 SPATA6LQ8N4H0 392 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 BPIFCQ8NFQ6 507 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 OR2T35Q8NGX2 323 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 OR2T11Q8NH01 316 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 PCDH19Q8TAB3 1148 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 ZNF583Q96ND8 569 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 DUSP26Q9BV47 211 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 CRISPLD1Q9H336 500 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 PRDM12Q9H4Q4 367 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 GSTO2Q9H4Y5 243 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 SH3BP4Q9P0V3 963 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 CA14Q9ULX7 337 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 NPTNQ9Y639 398 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MEX3AA1L020 520 aaKnown RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MEIS2O14770 477 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 NBNO60934 754 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 RAD17O75943 681 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 RECQL4O94761 1208 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 IL1AP01583 271 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MBP02144 154 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 HGFP14210 728 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 CYP2B6P20813 491 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MMP12P39900 470 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 RAB10P61026 200 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 NPRL3Q12980 569 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 DMP1Q13316 513 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 DGKZQ13574 1117 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 GPR176Q14439 515 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 HABP2Q14520 560 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 THEM4Q5T1C6 240 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 ZNF57Q68EA5 555 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 ZC3H14Q6PJT7 736 aaKnown RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 ZNF852Q6ZMS4 543 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 KCNMB4Q86W47 210 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 TMEM17Q86X19 198 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 COLGALT1Q8NBJ5 622 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 RXFP4Q8TDU9 374 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 P2RX7Q99572 595 aaKnown RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 NTPCRQ9BSD7 190 aaKnown RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 KATNB1Q9BVA0 655 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 CDCA4Q9BXL8 241 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 SAP130Q9H0E3 1048 aa13.25□□□□□ -0.29
SHMT2-226ENST00000556825 MRTO4Q9UKD2 239 aaKnown RBP13.25□□□□□ -0.29
SHMT2-226ENST00000556825 DENND4AQ7Z401 1863 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 LRRC37AA6NMS7 1700 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 SYNJ2BP-COX16A0A087WUM0 186 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 A0A0A0MRY4 1105 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 A0A1B0GW55 424 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 USP17L10C9JJH3 530 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 E9PI62 339 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 L7N2F9 121 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 ADAMDEC1O15204 470 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 UBXN7O94888 489 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 SCELO95171 688 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 MMP10P09238 476 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 NUDT7P0C024 238 aa13.24□□□□□ -0.29
SHMT2-226ENST00000556825 DUX4L2P0CJ85 424 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms