RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PRMT3O60678 531 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 SCELO95171 688 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 SNRPAP09012 282 aaKnown RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 GCAP28676 217 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 TYK2P29597 1187 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 PPP2R1BP30154 601 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 PLA2G16P53816 162 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ALDH18A1P54886 795 aaKnown RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 LIM2P55344 173 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 MAGOHP61326 146 aaKnown RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 LAPTM5Q13571 262 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ACAP2Q15057 778 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 EIF2S3LQ2VIR3 472 aaKnown RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 TTMPQ5BVD1 217 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 PAGE2BQ5JRK9 111 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ABHD17BQ5VST6 288 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 TRIM40Q6P9F5 258 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 TDRPQ86YL5 185 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 SRRM1Q8IYB3 904 aaKnown RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 RNF175Q8N4F7 328 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 APCDD1LQ8NCL9 501 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ST6GALNAC3Q8NDV1 305 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 MDS2Q8NDY4 140 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 OR7G3Q8NG95 312 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 OR1N1Q8NGS0 311 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ADAMTS18Q8TE60 1221 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 FAR1Q8WVX9 515 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 PGM2Q96G03 612 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 FAR2Q96K12 515 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 PTCHD1Q96NR3 888 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 PSMG3-AS1Q96PY0 264 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 SERINC2Q96SA4 455 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 SH3GL2Q99962 352 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 VPS11Q9H270 941 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 KCNK13Q9HB14 408 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 PRDM7Q9NQW5 492 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 AGPAT4Q9NRZ5 378 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF358Q9NW07 568 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 LGALS13Q9UHV8 139 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF180Q9UJW8 692 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF223Q9UK11 482 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 DOPEY1Q5JWR5 2465 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ANKUB1A6NFN9 424 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 A8MUI8 341 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 FOXO6A8MYZ6 492 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 RTCAO00442 366 aaKnown RBP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 POLR3GO15318 223 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 B3GALT2O43825 422 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 PRAMEF2O60811 474 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 AGFG2O95081 481 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 SIX3O95343 332 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 GFAPP14136 432 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 EPB42P16452 691 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 CNTFP26441 200 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 SERPINB1P30740 379 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 ST13P50502 369 aaKnown RBP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 MTTPP55157 894 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 TUBA3CQ13748 450 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 ESPL1Q14674 2120 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 PCBP2Q15366 365 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 TERF2Q15554 542 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 PFKFB4Q16877 469 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 FHL5Q5TD97 284 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 MED27Q6P2C8 311 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 TUBA3EQ6PEY2 450 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 FAM180AQ6UWF9 173 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 GOLGA7Q7Z5G4 137 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 CYP4X1Q8N118 509 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 LGI4Q8N135 537 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 ARMC10Q8N2F6 343 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 TEX9Q8N6V9 391 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 MTBPQ96DY7 904 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 PKNOX2Q96KN3 472 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF354BQ96LW1 612 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 MAGEB10Q96LZ2 347 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 SIGLEC12Q96PQ1 595 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 KCNC2Q96PR1 638 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 SMC6Q96SB8 1091 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF717Q9BY31 904 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 HES7Q9BYE0 225 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 KCNK9Q9NPC2 374 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 DMRT3Q9NQL9 472 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 KCMF1Q9P0J7 381 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 XPR1Q9UBH6 696 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 TEKT2Q9UIF3 430 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 ERRFI1Q9UJM3 462 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 DAPP1Q9UN19 280 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 PPIEQ9UNP9 301 aaKnown RBP9.66□□□□□ -0.86
SHMT2-224ENST00000556737 TSC22D4Q9Y3Q8 395 aa9.66□□□□□ -0.86
SHMT2-224ENST00000556737 CNTRLQ7Z7A1 2325 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 A0A088AWK7 358 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 GABRR3A8MPY1 467 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 A8MUA0 341 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 GOLGA8RI6L899 631 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 LDLRP01130 860 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 SBK3P0C264 359 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 PCNAP12004 261 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 EDN3P14138 238 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms