RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 OR4F21O95013 312 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 MLYCDO95822 493 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 COX6A1P12074 109 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 RNH1P13489 461 aaKnown RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 HIST1H1TP22492 207 aaPredicted RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 BSGP35613 385 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 ETV4P43268 484 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 CCL11P51671 97 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 RRADP55042 308 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 MTTPP55157 894 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 LIM2P55344 173 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 Q0VFX4 171 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 LCP2Q13094 533 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 DDX39BQ13838 428 aaKnown RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 PCLAFQ15004 111 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 RBBP7Q16576 425 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 RNFT1Q5M7Z0 435 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 CEP85LQ5SZL2 805 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 FRG2Q64ET8 278 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 MRM1Q6IN84 353 aaKnown RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 TRIM40Q6P9F5 258 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 FRMD7Q6ZUT3 714 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 CHSY3Q70JA7 882 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 EXOC3L1Q86VI1 746 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 MYLK4Q86YV6 388 aaPredicted RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 AMER2Q8N7J2 671 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 ACOT4Q8N9L9 421 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 SRFBP1Q8NEF9 429 aaKnown RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 TCP10LQ8TDR4 215 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 PPP4R1Q8TF05 950 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 PGM2Q96G03 612 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 FAR2Q96K12 515 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 IMMP1LQ96LU5 166 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 MAGEB10Q96LZ2 347 aaPredicted RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 FER1L6-AS2Q96M78 137 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 FRG2BQ96QU4 278 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 SERINC2Q96SA4 455 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 WDR77Q9BQA1 342 aaPredicted RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 GATA5Q9BWX5 397 aaPredicted RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 SORBS1Q9BX66 1292 aaKnown RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 ZNF700Q9H0M5 742 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 TNFRSF12AQ9NP84 129 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 FARSBQ9NSD9 589 aaKnown RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 SENP1Q9P0U3 644 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 SLC17A7Q9P2U7 560 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 TRPS1Q9UHF7 1281 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 DAPP1Q9UN19 280 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 PCDHGA9Q9Y5G4 932 aaKnown RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 MYO18BQ8IUG5 2567 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 RP1L1Q8IWN7 2480 aaPredicted RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 IGHV1-45A0A0A0MS14 117 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 SAP18O00422 153 aaKnown RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 MANBAO00462 879 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 RGS16O15492 202 aaPredicted RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 B3GALT2O43825 422 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 TRIM13O60858 407 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 B4GALT2O60909 372 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 ERLIN1O75477 346 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 EEDO75530 441 aaKnown RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 SEMA3DO95025 777 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 ESRRBO95718 433 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 HPP00738 406 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 PDGFAP04085 211 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 C8orf89P0DMQ9 161 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 SFTPCP11686 197 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 ACPPP15309 386 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 CERS1P27544 350 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 ALDH3A1P30838 453 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 TSFMP43897 325 aaKnown RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 HNRNPFP52597 415 aaKnown RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 PKNOX1P55347 436 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 RAB38P57729 211 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 NAA20P61599 178 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 BTG2P78543 158 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 TGM3Q08188 693 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 IFT88Q13099 833 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 MPP2Q14168 576 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 PCOLCEQ15113 449 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 MINDY4Q4G0A6 757 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 TCHHL1Q5QJ38 904 aaPredicted RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 LIPMQ5VYY2 423 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 FAAH2Q6GMR7 532 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 OR4C11Q6IEV9 310 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 TCTN3Q6NUS6 607 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 QSOX2Q6ZRP7 698 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 LANCL3Q6ZV70 420 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 GPRIN3Q6ZVF9 776 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 NDUFAF7Q7L592 441 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 ANKRD37Q7Z713 158 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 CROCCP2Q86T23 111 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 SCUBE1Q8IWY4 988 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 ZCCHC7Q8N3Z6 543 aaKnown RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 GALNT16Q8N428 558 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 CCNYL1Q8N7R7 359 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 CDYL2Q8N8U2 506 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 TMEM52Q8NDY8 209 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 FDCSPQ8NFU4 85 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 OR6Y1Q8NGX8 325 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 AGAP11Q8TF27 550 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 TSLPQ969D9 159 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms