RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CLOCKO15516 846 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 TAPBPO15533 448 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CPNE3O75131 537 aaKnown RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 VPS26AO75436 327 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 MTRF1O75570 445 aaKnown RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CEACAM4O75871 244 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 TBX6O95947 436 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 MT-ND3P03897 115 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PROCP04070 461 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ABCB1P08183 1280 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SLC35E2BP0CK96 405 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CD1DP15813 335 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 NPPBP16860 134 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CHRM3P20309 590 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PRKACBP22694 351 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SEPHS1P49903 392 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 EFNA3P52797 238 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ATP6V0D1P61421 351 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ESRRGP62508 458 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PRDX1Q06830 199 aaKnown RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SELENBP1Q13228 472 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 STX3Q13277 289 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 FXNQ16595 210 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 UGT8Q16880 541 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 TTLL9Q3SXZ7 439 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 TCHHL1Q5QJ38 904 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SNAP47Q5SQN1 464 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 GRTP1Q5TC63 336 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 AGAP7PQ5VUJ5 663 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 YOD1Q5VVQ6 348 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 FRMPD2BQ6IN97 320 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ANKRD26P1Q6NSI1 321 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 C19orf48Q6RUI8 117 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 LCTLQ6UWM7 567 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 C6orf15Q6UXA7 325 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CCDC81Q6ZN84 652 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SH2D5Q6ZV89 423 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 FAM129CQ86XR2 697 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 AFAP1L2Q8N4X5 818 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SLC15A4Q8N697 577 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 EXD3Q8N9H8 876 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 GALNT6Q8NCL4 622 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PDPRQ8NCN5 879 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ZNF420Q8TAQ5 688 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PROKR1Q8TCW9 393 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ADAMTS16Q8TE57 1224 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CT55Q8WUE5 264 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 UBTD2Q8WUN7 234 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 TANKQ92844 425 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 UBL7Q96S82 380 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 GPR87Q9BY21 358 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 AICDAQ9GZX7 198 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SPRTNQ9H040 489 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SYNDIG1Q9H7V2 258 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PDE7BQ9NP56 450 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 AKAP7Q9P0M2 348 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 IL17BQ9UHF5 180 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CNOT11Q9UKZ1 510 aaKnown RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CDC14AQ9UNH5 594 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PCDHGA11Q9Y5H2 935 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CFAP46Q8IYW2 2715 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SPTBN2O15020 2390 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 GOLGA4Q13439 2230 aaKnown RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 A0A1W2PPW3 197 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 TMEM150CB9EJG8 249 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 H0YJX3 145 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 H3BMQ9 156 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 KLK10O43240 276 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PRAMEF4O60810 478 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PIAS1O75925 651 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 MYO1DO94832 1006 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 KLHL2O95198 593 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ALOX5P09917 674 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SMIM10L1P0DMW3 83 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 MTHFD2P13995 350 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 MAGP20916 626 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CD247P20963 164 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 GP5P40197 560 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 KCNC1P48547 511 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 AQP5P55064 265 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ITGA1P56199 1179 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 AP1S2P56377 157 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 CTAG1AP78358 180 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ABATP80404 500 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 RHDQ02161 417 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 SLC18A2Q05940 514 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 HYAL2Q12891 473 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PRKAA1Q13131 559 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 IL10RAQ13651 578 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 ZNF460Q14592 562 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 OR4D1Q15615 310 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 TBR1Q16650 682 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PRAMEF17Q5VTA0 474 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 PRAMEF9Q5VWM5 478 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 FIGLAQ6QHK4 219 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 UBE2R2Q712K3 238 aaPredicted RBP3.72□□□□□ -1.81
LINC00648-202ENST00000555985 GPR155Q7Z3F1 870 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 VN1R4Q7Z5H5 301 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 VASH2Q86V25 355 aa3.72□□□□□ -1.81
LINC00648-202ENST00000555985 IGFN1Q86VF2 1251 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms