RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZNF473Q8WTR7 871 aaKnown RBP12.9□□□□□ -0.34
PCNX4-209ENST00000555569 UBE2E3Q969T4 207 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 CSF3RQ99062 836 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 MS4A8Q9BY19 250 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 ROGDIQ9GZN7 287 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 PRM3Q9NNZ6 103 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 ADAP2Q9NPF8 381 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 PRDM7Q9NQW5 492 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 SNX15Q9NRS6 342 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 CLDN16Q9Y5I7 305 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 TRGV8A0A0C4DH27 118 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 CCDC189A1A4V9 331 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 HMX2A2RU54 273 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 SYNDIG1LA6NDD5 238 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 CYR61O00622 381 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 SLC25A12O75746 678 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 WISP2O76076 250 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 MLYCDO95822 493 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 C2P06681 752 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 PCNAP12004 261 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 MTHFD2P13995 350 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 PPP2R1BP30154 601 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 TRHRP34981 398 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-209ENST00000555569 PHBP35232 272 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 DCTP40126 519 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 CYB561P49447 251 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 HLCSP50747 726 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 IRF9Q00978 393 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 ALDH6A1Q02252 535 aaKnown RBP12.89□□□□□ -0.35
PCNX4-209ENST00000555569 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 MAPKAPK3Q16644 382 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.89□□□□□ -0.35
PCNX4-209ENST00000555569 CEP128Q6ZU80 1094 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 UBE3DQ7Z6J8 389 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 CLNKQ7Z7G1 428 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 LAS2Q8IYD9 372 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 ARMC10Q8N2F6 343 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 RHEBL1Q8TAI7 183 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 THAP3Q8WTV1 239 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-209ENST00000555569 NCLNQ969V3 563 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 VMP1Q96GC9 406 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 FRMD6Q96NE9 622 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 KCNC2Q96PR1 638 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 TBCDQ9BTW9 1192 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 TRIM45Q9H8W5 580 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-209ENST00000555569 LYRM4Q9HD34 91 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 NINJ2Q9NZG7 142 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 MTRF1LQ9UGC7 380 aaKnown RBP12.89□□□□□ -0.35
PCNX4-209ENST00000555569 FBXW2Q9UKT8 454 aa12.89□□□□□ -0.35
PCNX4-209ENST00000555569 PPIEQ9UNP9 301 aaKnown RBP12.89□□□□□ -0.35
PCNX4-209ENST00000555569 TEX15Q9BXT5 2789 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 A0A096LPK6 155 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 NME2P1O60361 137 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 CTNSO60931 367 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 SH3BGRLO75368 114 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 TGFB1P01137 390 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 EPB42P16452 691 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 NME2P22392 152 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ATP5A1P25705 553 aaKnown RBP12.88□□□□□ -0.35
PCNX4-209ENST00000555569 SERPINB1P30740 379 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 CA7P43166 264 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 GPR143P51810 404 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 NAA30Q147X3 362 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ACAP2Q15057 778 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ELAVL1Q15717 326 aaKnown RBP12.88□□□□□ -0.35
PCNX4-209ENST00000555569 TMEM35AQ53FP2 167 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 KRTCAP3Q53RY4 240 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 GRHL2Q6ISB3 625 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 KLC3Q6P597 504 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF793Q6ZN11 406 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 CHSY3Q70JA7 882 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF227Q86WZ6 799 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 TMEM132CQ8N3T6 1108 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 MMGT1Q8N4V1 131 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 TEX9Q8N6V9 391 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ACOT4Q8N9L9 421 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 OR7G3Q8NG95 312 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 TMEM125Q96AQ2 219 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 CMTM7Q96FZ5 175 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 GPR137Q96N19 417 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 CCDC77Q9BR77 488 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 TSPAN10Q9H1Z9 355 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ACSS3Q9H6R3 686 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 KCMF1Q9P0J7 381 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 SUCOQ9UBS9 1254 aaKnown RBP12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ADGRE2Q9UHX3 823 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF223Q9UK11 482 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ANGPTL3Q9Y5C1 460 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 ITPR2Q14571 2701 aa12.88□□□□□ -0.35
PCNX4-209ENST00000555569 NPIPA5E9PKD4 350 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 RTCAO00442 366 aaKnown RBP12.87□□□□□ -0.35
PCNX4-209ENST00000555569 CCL21O00585 134 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 SLC19A2O60779 497 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 SCELO95171 688 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 KLHL2O95198 593 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 IFNA16P05015 189 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 GFAPP14136 432 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 TYK2P29597 1187 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 SSR2P43308 183 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms