RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PLPP5Q8NEB5 264 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 KCNE4Q8WWG9 221 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 STON2Q8WXE9 905 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 NACC2Q96BF6 587 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 MIEF2Q96C03 454 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 TM4SF18Q96CE8 201 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 ZNF317Q96PQ6 595 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 MAPKAP1Q9BPZ7 522 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 NUF2Q9BZD4 464 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 PRDM9Q9NQV7 894 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 C14orf105Q9NVL8 296 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 RIC8BQ9NVN3 520 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 LYARQ9NX58 379 aaKnown RBP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 CTSFQ9UBX1 484 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 GPN3Q9UHW5 284 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 TCFL5Q9UL49 500 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 FER1L5A0AVI2 2057 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 NCOR2Q9Y618 2525 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 ATP6AP2A0A1C7CYW4 349 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 BLACEA4D250 179 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 SDHDO14521 159 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 GUCY1B2O75343 617 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 ATP6AP2O75787 350 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 FHP07954 510 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 FAM58BPP0C7Q3 252 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 KITP10721 976 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 LIFP15018 202 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 TIA1P31483 386 aaKnown RBP eCLIP11.96□□□□□ -0.49
SYNE2-219ENST00000555323 XCR1P46094 333 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 EMX2Q04743 252 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 SSPNQ14714 243 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 NR6A1Q15406 480 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 PDCD2Q16342 344 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-219ENST00000555323 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 ATP6AP1LQ52LC2 224 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 CRTC2Q53ET0 693 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-219ENST00000555323 NOXRED1Q6NXP6 359 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 CYP20A1Q6UW02 462 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 EPGNQ6UW88 154 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 FAM47EQ6ZV65 393 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 MAVSQ7Z434 540 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 LAPTM4BQ86VI4 370 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 ZC3H7AQ8IWR0 971 aaKnown RBP11.96□□□□□ -0.49
SYNE2-219ENST00000555323 PARP9Q8IXQ6 854 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 ENDOVQ8N8Q3 282 aaKnown RBP11.96□□□□□ -0.49
SYNE2-219ENST00000555323 OR2Y1Q8NGV0 311 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 KIAA1143Q96AT1 154 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-219ENST00000555323 TUBGCP3Q96CW5 907 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 PEX11GQ96HA9 241 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 SLC45A3Q96JT2 553 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 AKTIPQ9H8T0 292 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 GPN2Q9H9Y4 310 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-219ENST00000555323 LANCL2Q9NS86 450 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 HCN3Q9P1Z3 774 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 MARCOQ9UEW3 520 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-219ENST00000555323 PHF11Q9UIL8 331 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 PADI2Q9Y2J8 665 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 ATG4BQ9Y4P1 393 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 USH1CQ9Y6N9 552 aa11.96□□□□□ -0.49
SYNE2-219ENST00000555323 ASPMQ8IZT6 3477 aa11.96□□□□□ -0.5
SYNE2-219ENST00000555323 SCN3AQ9NY46 2000 aa11.96□□□□□ -0.5
SYNE2-219ENST00000555323 FREM2Q5SZK8 3169 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 A0A087WV48 116 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 A0A1W2PR48 441 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 ARHGAP10A1A4S6 786 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 FAM227AF5H4B4 570 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 PCDH17O14917 1159 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 RRP8O43159 456 aaKnown RBP11.95□□□□□ -0.5
SYNE2-219ENST00000555323 KLK10O43240 276 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 EFSO43281 561 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 PCDH7O60245 1069 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 PEX11AO75192 247 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 MYO1DO94832 1006 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 GBAP04062 536 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 UMODP07911 640 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 PCSK2P16519 638 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 JAK1P23458 1154 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 MAPK12P53778 367 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 HNRNPH2P55795 449 aaKnown RBP11.95□□□□□ -0.5
SYNE2-219ENST00000555323 KLC1Q07866 573 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 ERV3-1Q14264 604 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 OGFOD2Q6N063 350 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 ZNF595Q8IYB9 648 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 C7orf57Q8NEG2 295 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 SIKE1Q9BRV8 207 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 YIPF2Q9BWQ6 316 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 ASIC5Q9NY37 505 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 IL17BQ9UHF5 180 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 FBXW2Q9UKT8 454 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 MMACHCQ9Y4U1 282 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 CLDN16Q9Y5I7 305 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 SPACA6W5XKT8 324 aa11.95□□□□□ -0.5
SYNE2-219ENST00000555323 PSMD12O00232 456 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 CLDN4O14493 209 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 CTNSO60931 367 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 JRKO75564 520 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 CREG1O75629 220 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 IGHEP01854 428 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 ANXA4P09525 319 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms