RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 MRPS33Q9Y291 106 aaKnown RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 ATP6AP2A0A1C7CYW4 349 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 GNG14A0A1W2PPG7 69 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 BLACEA4D250 179 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 TMPRSS11DO60235 418 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 DNAJB6O75190 326 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 PEX11AO75192 247 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 ATP6AP2O75787 350 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 TGDSO95455 350 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 GBAP04062 536 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 JUNP05412 331 aaKnown RBP13.48□□□□□ -0.25
CHD8-208ENST00000555301 FHP07954 510 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 CYC1P08574 325 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 CPN2P22792 545 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 MAPK1P28482 360 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 TLX1P31314 330 aaPredicted RBP13.48□□□□□ -0.25
CHD8-208ENST00000555301 BUD31P41223 144 aaPredicted RBP13.48□□□□□ -0.25
CHD8-208ENST00000555301 FOLR3P41439 243 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 MAD2L1Q13257 205 aaPredicted RBP13.48□□□□□ -0.25
CHD8-208ENST00000555301 KIAA0040Q15053 153 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 SMU1Q2TAY7 513 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 TUBB8Q3ZCM7 444 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 GALNTL6Q49A17 601 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 LRRC69Q6ZNQ3 347 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 PROSER1Q86XN7 944 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 ZC3H7AQ8IWR0 971 aaKnown RBP13.48□□□□□ -0.25
CHD8-208ENST00000555301 PARP9Q8IXQ6 854 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 EFCAB3Q8N7B9 438 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 OR2Y1Q8NGV0 311 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 ZCCHC14Q8WYQ9 949 aaKnown RBP13.48□□□□□ -0.25
CHD8-208ENST00000555301 SPSB2Q99619 263 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 MAPKAP1Q9BPZ7 522 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 WDR41Q9HAD4 459 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 KCMF1Q9P0J7 381 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 FBXW2Q9UKT8 454 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 TCFL5Q9UL49 500 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 WBP11Q9Y2W2 641 aaKnown RBP13.48□□□□□ -0.25
CHD8-208ENST00000555301 PTRH2Q9Y3E5 179 aaKnown RBP13.48□□□□□ -0.25
CHD8-208ENST00000555301 ASB4Q9Y574 426 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
CHD8-208ENST00000555301 CLDN4O14493 209 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 CNOT3O75175 753 aaKnown RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 KLF7O75840 302 aaPredicted RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 VIMP08670 466 aaKnown RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 ANXA4P09525 319 aaPredicted RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 LIFP15018 202 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 ACPPP15309 386 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 F8A1P23610 371 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 RPL38P63173 70 aaKnown RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 RAE1P78406 368 aaKnown RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 TNFRSF17Q02223 184 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 KLC1Q07866 573 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 MINDY4Q4G0A6 757 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 RFTN2Q52LD8 501 aaPredicted RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 C6orf136Q5SQH8 315 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 NOXRED1Q6NXP6 359 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 ZNF595Q8IYB9 648 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 FNDC5Q8NAU1 212 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 C7orf57Q8NEG2 295 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 NACC2Q96BF6 587 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 SLC45A3Q96JT2 553 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 FCRL1Q96LA6 429 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 CCNL2Q96S94 520 aaPredicted RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 SIKE1Q9BRV8 207 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 CRB3Q9BUF7 120 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 ACTL8Q9H568 366 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 SOX17Q9H6I2 414 aaPredicted RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 AKTIPQ9H8T0 292 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 ATG4BQ9Y4P1 393 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 POLR3HQ9Y535 204 aaPredicted RBP13.47□□□□□ -0.25
CHD8-208ENST00000555301 NCOR2Q9Y618 2525 aa13.47□□□□□ -0.25
CHD8-208ENST00000555301 ASPMQ8IZT6 3477 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 SYNDIG1LA6NDD5 238 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 CYR61O00622 381 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 SDHDO14521 159 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 ZNF195O14628 629 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 PCDH17O14917 1159 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 PROM1O43490 865 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 CREG1O75629 220 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 RECKO95980 971 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 IGHEP01854 428 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 HEXBP07686 556 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 PRR35P0CG20 571 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 ALOX15P16050 662 aaPredicted RBP13.46□□□□□ -0.25
CHD8-208ENST00000555301 EMP2P54851 167 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 HNRNPH2P55795 449 aaKnown RBP13.46□□□□□ -0.25
CHD8-208ENST00000555301 HSD17B7P56937 341 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 MC1RQ01726 317 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 EMX2Q04743 252 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 ZNF763Q0D2J5 394 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 ERV3-1Q14264 604 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 SSPNQ14714 243 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 HEPACAMQ14CZ8 416 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 MFSD4BQ5TF39 518 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 BROXQ5VW32 411 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 QSOX2Q6ZRP7 698 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 VASH2Q86V25 355 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 PRSS58Q8IYP2 241 aa13.46□□□□□ -0.25
CHD8-208ENST00000555301 FAM47BQ8NA70 645 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms