RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 PTX3P26022 381 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 ARSFP54793 590 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 RGS8P57771 180 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 CTBSQ01459 385 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 ACVR1Q04771 509 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 CYBRD1Q53TN4 286 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 DPPA4Q7L190 304 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 THAP5Q7Z6K1 395 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 NLGN4XQ8N0W4 816 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 SLC34A3Q8N130 599 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 OR9Q1Q8NGQ5 310 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 ISG20Q96AZ6 181 aaKnown RBP11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 SLC29A3Q9BZD2 475 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 TVP23BQ9NYZ1 205 aa11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 ZNF646O15015 1829 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF40-206ENST00000555232 EEDO75530 441 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 SOX30O94993 753 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 GADD45GO95257 159 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 CCNYL3P0C7X3 344 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 CERS1P27544 350 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 KDELR2P33947 212 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 NKX2-5P52952 324 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 ILF2Q12905 390 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 OGFRL1Q5TC84 451 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 Q6ZS52 159 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 Q6ZSR6 202 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 GRHL3Q8TE85 626 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 TMEM203Q969S6 136 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 RGMAQ96B86 450 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 RBM18Q96H35 190 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 CEP295NLQ96MC4 621 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 OR2M4Q96R27 311 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 SPNS1Q9H2V7 528 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 EPS8L2Q9H6S3 715 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 FGF22Q9HCT0 170 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 SLC6A13Q9NSD5 602 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 IFT80Q9P2H3 777 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 NPIPA5A0A0B4J1W7 369 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 NPIPA7E9PJI5 369 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 NUAK1O60285 661 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 C1QCP02747 245 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 NPIPA8P0DM63 369 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 CAPGP40121 348 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 CLDN8P56748 225 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 PFN3P60673 137 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 HBA1P69905 142 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 LGI4Q8N135 537 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 MINDY1Q8N5J2 469 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 FAM3CQ92520 227 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 TOE1Q96GM8 510 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 SLC35G5Q96KT7 338 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 CCM2LQ9NUG4 571 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 THUMPD1Q9NXG2 353 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 TMEM181Q9P2C4 612 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 FAM227AF5H4B4 570 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 H3BNX3 289 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 MYF5P13349 255 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 DSTNP60981 165 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 RPL6Q02878 288 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 TRAP1Q12931 704 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 OR2T5Q6IEZ7 315 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 ZNF852Q6ZMS4 543 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 SNX29P2Q8IUI4 249 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 OR2T29Q8NH02 315 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 STARD8Q92502 1023 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 ISOC1Q96CN7 298 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 PYURFQ96I23 114 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 REEP4Q9H6H4 257 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 GDE1Q9NZC3 331 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 DNAJB9Q9UBS3 223 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 SH2B3Q9UQQ2 575 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 BTBD3Q9Y2F9 522 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 NOX1Q9Y5S8 564 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 MED12Q93074 2177 aa11.69□□□□□ -0.54
ARHGEF40-206ENST00000555232 TRIM64CA6NLI5 447 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 SLC22A2O15244 555 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 LDB3O75112 727 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 SAGP10523 405 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 RPS3P23396 243 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■■■■ 35.9
ARHGEF40-206ENST00000555232 ADRM1Q16186 407 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 VMACQ2NL98 169 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 DEPDC1Q5TB30 811 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 GALNT18Q6P9A2 607 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 CYHR1Q6ZMK1 362 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 OR52E1Q8NGJ3 308 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 ZBED6CLQ96FA7 236 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 LRIG1Q96JA1 1093 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 ZNF696Q9H7X3 374 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 DDX28Q9NUL7 540 aaKnown RBP11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 CLEC4AQ9UMR7 237 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 SNX11Q9Y5W9 270 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 ST14Q9Y5Y6 855 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 MOSPD3O75425 235 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 ZNF821O75541 412 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 AP2A2O94973 939 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 THEGLP0DJG4 465 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 JUNDP17535 347 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 PPP2CBP62714 309 aa11.68□□□□□ -0.54
ARHGEF40-206ENST00000555232 PPP2CAP67775 309 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms