RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TATDN1Q6P1N9 297 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 TRIM65Q6PJ69 517 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 LCLAT1Q6UWP7 414 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 OR8H1Q8NGG4 311 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 OR10G7Q8NGN6 311 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 C8orf46Q8TAG6 207 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 PRCCQ92733 491 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZNF560Q96MR9 790 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 PRAM1Q96QH2 718 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 RUFY1Q96T51 708 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 S1PR3Q99500 378 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 SSX3Q99909 188 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 NTMT1Q9BV86 223 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 UBE2TQ9NPD8 197 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZDHHC18Q9NUE0 388 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 ACOXLQ9NUZ1 547 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 ANO10Q9NW15 660 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 TRIM10Q9UDY6 481 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 SH3GLB1Q9Y371 365 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 GPRASP1Q5JY77 1395 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 IGLV7-46A0A075B6I9 117 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 LOC105371242A0A075B767 164 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 K7EQD1 137 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 OGTO15294 1046 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 ARHGEF9O43307 516 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 KRT86O43790 486 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 ECE2O60344 883 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZG16O60844 167 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 GMNNO75496 209 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 BCAS2O75934 225 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 ANGPTL1O95841 491 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 PDHA2P29803 388 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 OR1D2P34982 312 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 GSCP56915 257 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 EVCP57679 992 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 ERVK-16P61578 105 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 GCKRQ14397 625 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 KRT81Q14533 505 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 MEF2DQ14814 521 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 RAB12Q6IQ22 244 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 C3P1Q6ZMU1 363 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 Q71RC1 249 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 C17orf64Q86WR6 236 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 OR4A16Q8NH70 328 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 UBTD2Q8WUN7 234 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 SLCO4A1Q96BD0 722 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 OPRPNQ99935 248 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 SPXQ9BT56 116 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 ABCG8Q9H221 673 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 GPN1Q9HCN4 374 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 MED17Q9NVC6 651 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 NDE1Q9NXR1 346 aa4.6□□□□□ -1.67
CKS1BP1-201ENST00000555221 GLTPD2A6NH11 291 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 MPTX1A8MV57 137 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 KPNA7A9QM74 516 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 INPP4BO15327 924 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 TNFSF12O43508 249 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 TLX2O43763 284 aaPredicted RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 CPNE6O95741 557 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 SERPINF2P08697 491 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 EZRP15311 586 aaKnown RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 NSFP46459 744 aaKnown RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 TMEM50BP56557 158 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 BACE1P56817 501 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 ABCE1P61221 599 aaKnown RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 MFGE8Q08431 387 aaPredicted RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 PPP1R8Q12972 351 aaKnown RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 KRT31Q15323 416 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 FAM189A2Q15884 450 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 OTUD3Q5T2D3 398 aaPredicted RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 GFI1BQ5VTD9 330 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 MIER3Q7Z3K6 550 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 DHX29Q7Z478 1369 aaKnown RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 CACUL1Q86Y37 369 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 CCDC197Q8NCU1 140 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 URGCPQ8TCY9 931 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 NR4A3Q92570 626 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 GLYATL1Q969I3 302 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 DTD2Q96FN9 168 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 ERGIC2Q96RQ1 377 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 TRPV6Q9H1D0 765 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 GANQ9H2C0 597 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 TNMDQ9H2S6 317 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 DCLRE1BQ9H816 532 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 KCNMB3Q9NPA1 279 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 BICRAQ9NZM4 1560 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 STRAPQ9Y3F4 350 aaKnown RBP4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 OR1A2Q9Y585 309 aa4.59□□□□□ -1.67
CKS1BP1-201ENST00000555221 RPGRIP1LQ68CZ1 1315 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 SRRM4A7MD48 611 aaKnown RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 TLR4O00206 839 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 TFECO14948 347 aaPredicted RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 B4GAT1O43505 415 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 LYNP07948 512 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 TRIM49P0CI25 452 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 TRIM49CP0CI26 452 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 B4GALT1P15291 398 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 PKLRP30613 574 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 ALDH3B1P43353 468 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms