RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 PGS1Q32NB8 556 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 FAM69BQ5VUD6 431 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 YTHDF3Q7Z739 585 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 KMT5CQ86Y97 462 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 HOMEZQ8IX15 550 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CARFQ8N187 725 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 TMEM52Q8NDY8 209 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 RP9Q8TA86 221 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 TM4SF18Q96CE8 201 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 METTL2AQ96IZ6 378 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 MAPKAP1Q9BPZ7 522 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 IL1RL2Q9HB29 575 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 TXLNGQ9NUQ3 528 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 AHSPQ9NZD4 102 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 FBXW2Q9UKT8 454 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CLCA2Q9UQC9 943 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 LOXL2Q9Y4K0 774 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 ATG4BQ9Y4P1 393 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 LAMA5O15230 3695 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 CFAP47Q6ZTR5 3102 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 CEP295Q9C0D2 2601 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 MYOCOSA0A1B0GUC4 107 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 FITM1A5D6W6 292 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 CCDC154A6NI56 674 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 GABRR3A8MPY1 467 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 SCAMP2O15127 329 aaKnown RBP10.18□□□□□ -0.78
TDP1-211ENST00000555178 SRPX2O60687 465 aaPredicted RBP10.18□□□□□ -0.78
TDP1-211ENST00000555178 RDH16O75452 317 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 LAMP1P11279 417 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 COX7A2P14406 83 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 ALOX12P18054 663 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 SPINK2P20155 84 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 CSTF2P33240 577 aaKnown RBP eCLIP10.18□□□□□ -0.78
TDP1-211ENST00000555178 CPOXP36551 454 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 MAPK10P53779 464 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 C2orf80Q0P641 193 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 ERV3-1Q14264 604 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 HERC3Q15034 1050 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 C3orf38Q5JPI3 329 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 C18orf63Q68DL7 685 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 OR4F3Q6IEY1 312 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 FAM71E1Q6IPT2 247 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 DNAJC14Q6Y2X3 702 aaPredicted RBP10.18□□□□□ -0.78
TDP1-211ENST00000555178 TTLL10Q6ZVT0 673 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 TMEM132CQ8N3T6 1108 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 EFCAB3Q8N7B9 438 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 AGBL5Q8NDL9 886 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 N4BP2L2Q92802 583 aaPredicted RBP10.18□□□□□ -0.78
TDP1-211ENST00000555178 CIDECQ96AQ7 238 aaPredicted RBP10.18□□□□□ -0.78
TDP1-211ENST00000555178 CSF3RQ99062 836 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 RBCK1Q9BYM8 510 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 MYNNQ9NPC7 610 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 SLC22A11Q9NSA0 550 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 TAS2R1Q9NYW7 299 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 MAP10Q9P2G4 905 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 PACSIN3Q9UKS6 424 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 SATB2Q9UPW6 733 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 B3GALT1Q9Y5Z6 326 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 NUP210LQ5VU65 1888 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 ZSCAN9O15535 394 aaPredicted RBP10.18□□□□□ -0.78
TDP1-211ENST00000555178 JRKO75564 520 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 C1QCP02747 245 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 PGRP06401 933 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 FAM58BPP0C7Q3 252 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 PRDX6P30041 224 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 PTGER1P34995 402 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 ALDH9A1P49189 494 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 ITGA1P56199 1179 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 MXRA7P84157 204 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 TLR1Q15399 786 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 MPEG1Q2M385 716 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 MRM1Q6IN84 353 aaKnown RBP10.18□□□□□ -0.78
TDP1-211ENST00000555178 RAB11FIP2Q7L804 512 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 PAGE2Q7Z2X7 111 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 DPYSL5Q9BPU6 564 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 MESP1Q9BRJ9 268 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 TBCDQ9BTW9 1192 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 SLC25A23Q9BV35 468 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 COPS7BQ9H9Q2 264 aaPredicted RBP10.18□□□□□ -0.78
TDP1-211ENST00000555178 SLC6A13Q9NSD5 602 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 CUTCQ9NTM9 273 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 HCN3Q9P1Z3 774 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 PISDQ9UG56 409 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 ERVK-11Q9UQG0 969 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 ASB4Q9Y574 426 aa10.18□□□□□ -0.78
TDP1-211ENST00000555178 A0A1W2PR48 441 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 MRASO14807 208 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 GALR3O60755 368 aaPredicted RBP10.17□□□□□ -0.78
TDP1-211ENST00000555178 AIFM1O95831 613 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 FURINP09958 794 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 MSL3P1P0C860 447 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 PRPS1L1P21108 318 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 ALAS2P22557 587 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 WNT3P56703 355 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 KCNJ2P63252 427 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 MC2RQ01718 297 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 KLC1Q07866 573 aa10.17□□□□□ -0.78
TDP1-211ENST00000555178 TRA2AQ13595 282 aaKnown RBP eCLIP10.17□□□□□ -0.78
TDP1-211ENST00000555178 CAPRIN1Q14444 709 aaKnown RBP10.17□□□□□ -0.78
TDP1-211ENST00000555178 CLPPQ16740 277 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms