RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 FAM234AQ9H0X4 552 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 EBF3Q9H4W6 596 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ERVK-19Q9WJR5 959 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 SCN1AP35498 2009 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 H3BNX3 289 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 UGT1A9O60656 530 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF780AO75290 641 aaPredicted RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TSPAN15O95858 294 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 SERPINA7P05543 415 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 LPLP06858 475 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 UGT1A6P19224 532 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 PTGER3P43115 390 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 SLC15A1P46059 708 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 RPS24P62847 133 aaKnown RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 NPRL3Q12980 569 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 DUOXA1Q1HG43 343 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF648Q5T619 568 aaPredicted RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TSTD2Q5T7W7 516 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ESX1Q8N693 406 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 DENND1AQ8TEH3 1009 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 GPR174Q9BXC1 333 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 UGT1A7Q9HAW7 530 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 UGT1A10Q9HAW8 530 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 UGT1A8Q9HAW9 530 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 SQORQ9Y6N5 450 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ABCA1O95477 2261 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TTLL8A6PVC2 850 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 AKR1C4P17516 323 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 GDPD4Q6W3E5 623 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 XYLT1Q86Y38 959 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 GOLM1Q8NBJ4 401 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 MALSU1Q96EH3 234 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 HERPUD2Q9BSE4 406 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 NUSAP1Q9BXS6 441 aaKnown RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 KCNK13Q9HB14 408 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TAS2R3Q9NYW6 316 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 DNAJB11Q9UBS4 358 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 GHRLQ9UBU3 117 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 DUX1O43812 170 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TPSB2P20231 275 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TPSAB1Q15661 275 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 APOBEC3HQ6NTF7 200 aaKnown RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF517Q6ZMY9 492 aaPredicted RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 THOC6Q86W42 341 aaKnown RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 PRELID2Q8N945 189 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 SLC44A1Q8WWI5 657 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ZDHHC12Q96GR4 267 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 PDLIM2Q96JY6 352 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 SUV39H2Q9H5I1 410 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TLR9Q9NR96 1032 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TUBA8Q9NY65 449 aaPredicted RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 SH3PXD2BA1X283 911 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 EDN3P14138 238 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 RPS3P23396 243 aaKnown RBP eCLIP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 EPHA4P54764 986 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 ROR2Q01974 943 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 KCNC4Q03721 635 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 RALGPS1Q5JS13 557 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 C1orf52Q8N6N3 182 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 BSCL2Q96G97 398 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 METTL2AQ96IZ6 378 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 TPT1P8Q9HAU6 139 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 TLL2Q9Y6L7 1015 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 COL5A2P05997 1499 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SMIM28A0A1B0GU29 152 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 A0A1W2PPW3 197 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 A6NHS1 94 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 LAMTOR5O43504 91 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PEX10O60683 326 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SRPRAP08240 638 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 GSTM3P21266 225 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 C6orf141Q5SZD1 244 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 DCST2Q5T1A1 773 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 RNF220Q5VTB9 566 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 AWAT2Q6E213 333 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PDE7BQ9NP56 450 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PRTFDC1Q9NRG1 225 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 TAS2R10Q9NYW0 307 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 KLHL42Q9P2K6 505 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 CMAHPQ9Y471 501 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 WNT6Q9Y6F9 365 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 MEF2AQ02078 507 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 GLT8D1Q68CQ7 371 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 TXNDC8Q6A555 127 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SUSD1Q6UWL2 747 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF781Q8N8C0 355 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 OR14L1PQ8NHC6 308 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SCAMP5Q8TAC9 235 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SNIP1Q8TAD8 396 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 FAM83CQ9BQN1 747 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 BTBD1Q9H0C5 482 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PCYT1BQ9Y5K3 369 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 H0Y8G0 127 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 TBX18O95935 607 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 FSTL4Q6MZW2 842 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PIM3Q86V86 326 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 LIPHQ8WWY8 451 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 FRZBQ92765 325 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 KATNBL1Q9H079 304 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms