RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 HSD3B2P26439 372 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 MAP4P27816 1152 aaKnown RBP10.63□□□□□ -0.71
SHMT2-216ENST00000554975 PRDX3P30048 256 aaKnown RBP10.63□□□□□ -0.71
SHMT2-216ENST00000554975 HTR6P50406 440 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 NR1H2P55055 460 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 NME5P56597 212 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 UFM1P61960 85 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 TUBA4AP68366 448 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 CDK3Q00526 305 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 ABHD18Q0P651 414 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 CSTF3Q12996 717 aaKnown RBP10.63□□□□□ -0.71
SHMT2-216ENST00000554975 DYNC1I2Q13409 638 aaKnown RBP10.63□□□□□ -0.71
SHMT2-216ENST00000554975 CYP51A1Q16850 503 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 NADK2Q4G0N4 442 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 KCTD21Q4G0X4 260 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 SYTL3Q4VX76 610 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 FAM98BQ52LJ0 330 aaKnown RBP10.63□□□□□ -0.71
SHMT2-216ENST00000554975 SLC30A9Q6PML9 568 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 Q6ZSR9 355 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 UBE2R2Q712K3 238 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-216ENST00000554975 TECPR1Q7Z6L1 1165 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 TRIM74Q86UV6 250 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 ZNF761Q86XN6 746 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-216ENST00000554975 ADGRG5Q8IZF4 528 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 NAGSQ8N159 534 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 SFRP1Q8N474 314 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 GPR26Q8NDV2 337 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 OR52E4Q8NGH9 312 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 PROKR1Q8TCW9 393 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 MCOLN3Q8TDD5 553 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 CANT1Q8WVQ1 401 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 ASZ1Q8WWH4 475 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 LRTOMTQ8WZ04 291 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 CNBD2Q96M20 576 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 RDH12Q96NR8 316 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 VPS35Q96QK1 796 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 SLC39A3Q9BRY0 314 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 TEX101Q9BY14 249 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 UGT2B28Q9BY64 529 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 ASPSCR1Q9BZE9 553 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 ELOVL6Q9H5J4 265 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 IL1RL2Q9HB29 575 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 DNAJC11Q9NVH1 559 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 TAAR2Q9P1P5 351 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 GIMAP2Q9UG22 337 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 MAP4K5Q9Y4K4 846 aa10.63□□□□□ -0.71
SHMT2-216ENST00000554975 A8MU76 341 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 TAPBPO15533 448 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 GPR39O43194 453 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 STK17BO94768 372 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 DLGAP3O95886 979 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 CATP04040 527 aaKnown RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 PRF1P14222 555 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 ATP1B2P14415 290 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 SLC2A4P14672 509 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 AOAHP28039 575 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 GRNP28799 593 aaKnown RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 MSX2P35548 267 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 STAT5AP42229 794 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 CASP2P42575 452 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 ROR2Q01974 943 aaKnown RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 DPTQ07507 201 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 APOFQ13790 326 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 ERV3-1Q14264 604 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 CAPRIN1Q14444 709 aaKnown RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 ATP6AP1Q15904 470 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 CLPPQ16740 277 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 PHKG1Q16816 387 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 ZNF765Q7L2R6 523 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 KLHDC8AQ8IYD2 350 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 TMEM132CQ8N3T6 1108 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 GALNT4Q8N4A0 578 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 SNX31Q8N9S9 440 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 SLCO4A1Q96BD0 722 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 FBXL8Q96CD0 374 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 RMND5BQ96G75 393 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 FOPNLQ96NB1 174 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 SPATA16Q9BXB7 569 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 FAM83DQ9H4H8 585 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 ERRFI1Q9UJM3 462 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 ZNF490Q9ULM2 529 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 MYRFQ9Y2G1 1151 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 TMEM98Q9Y2Y6 226 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 TMEM184BQ9Y519 407 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-216ENST00000554975 PRSS21Q9Y6M0 314 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 AP1M2Q9Y6Q5 423 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 AKAP9Q99996 3911 aa10.62□□□□□ -0.71
SHMT2-216ENST00000554975 MTORP42345 2549 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 ASPDHA6ND91 283 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 FAM220BPB1ANY3 271 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 ANKRD28O15084 1053 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 GSTA4O15217 222 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 TIPRLO75663 272 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 SCELO95171 688 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 RASAL1O95294 804 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 DDAH2O95865 285 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 HPRP00739 348 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 CEACAM5P06731 702 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 SMIM18P0DKX4 95 aa10.61□□□□□ -0.71
SHMT2-216ENST00000554975 G6PDP11413 515 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms