RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CLDN24A6NM45 220 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 A8MVJ9 347 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 NCF1CA8MVU1 366 aaPredicted RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 MANBAO00462 879 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 BCKDKO14874 412 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 MID1O15344 667 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 LATO43561 262 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 JRKO75564 520 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 CLDN9O95484 217 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ADH1BP00325 375 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 PIRTP0C851 137 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 GIMD1P0DJR0 217 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 HSD3B1P14060 373 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 NCF1P14598 390 aaPredicted RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 FPR1P21462 350 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 C5AR1P21730 350 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 MATN1P21941 496 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 HSD3B2P26439 372 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 CD40LGP29965 261 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 DNAJA1P31689 397 aaKnown RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 S100A3P33764 101 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 SHMT2P34897 504 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 NUDT1P36639 197 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ARL1P40616 181 aaPredicted RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 PNLIPRP1P54315 467 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 RPL38P63173 70 aaKnown RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 BCL2L1Q07817 233 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 KCNAB2Q13303 367 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 VEZF1Q14119 521 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ELAVL3Q14576 367 aaKnown RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 PLCL1Q15111 1095 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 CST6Q15828 149 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 TRIM16LQ309B1 348 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 POM121L1PQ3SYA9 428 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 FAM174BQ3ZCQ3 159 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ARSIQ5FYB1 569 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 DUS1LQ6P1R4 473 aaKnown RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 TAS2R42Q7RTR8 314 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 PIWIL3Q7Z3Z3 882 aaKnown RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 DSG4Q86SJ6 1040 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 TRIM74Q86UV6 250 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 TRIM73Q86UV7 250 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 DCP2Q8IU60 420 aaKnown RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 LACC1Q8IV20 430 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ARL14Q8N4G2 192 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ZBTB2Q8N680 514 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ABHD11Q8NFV4 315 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 OR52B6Q8NGF0 335 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 FKBP10Q96AY3 582 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 RHBDF1Q96CC6 855 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 CMTM7Q96FZ5 175 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 LIN37Q96GY3 246 aaPredicted RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 LYSMD1Q96S90 227 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 FAM129BQ96TA1 746 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 HEPHQ9BQS7 1158 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 FUNDC2Q9BWH2 189 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 CPEB1Q9BZB8 566 aaKnown RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 ABCG4Q9H172 646 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ATP13A3Q9H7F0 1226 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 PAK1IP1Q9NWT1 392 aaPredicted RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 VAPAQ9P0L0 249 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 SCHIP1Q9P0W5 487 aaPredicted RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 GMPR2Q9P2T1 348 aaKnown RBP10.65□□□□□ -0.7
SRP54-205ENST00000554803 IL36AQ9UHA7 158 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 IKZF3Q9UKT9 509 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 ENTPD2Q9Y5L3 495 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 U3KQA8 63 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 UNC13CQ8NB66 2214 aa10.65□□□□□ -0.71
SRP54-205ENST00000554803 ZFHX3Q15911 3703 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 hCG_2014768A0A024R1R8 64 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 A0A1B0GTL3 188 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 PMS2P1A4D2B8 440 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 AGAP14A8MT82 685 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 M0R3G1 203 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 BCAS1O75363 584 aaPredicted RBP10.64□□□□□ -0.71
SRP54-205ENST00000554803 LEFTY1O75610 366 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 STK16O75716 305 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 PGLSO95336 258 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 POP4O95707 220 aaKnown RBP10.64□□□□□ -0.71
SRP54-205ENST00000554803 ANGPTL1O95841 491 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 MPC1LP0DKB6 136 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 ZNF182P17025 639 aaPredicted RBP10.64□□□□□ -0.71
SRP54-205ENST00000554803 CTPS1P17812 591 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 PRPS1L1P21108 318 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 PCMT1P22061 227 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 IGFBP5P24593 272 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 ACVR2AP27037 513 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 ELK4P28324 431 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 SERPINA4P29622 427 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 NSG1P42857 185 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 RECQLP46063 649 aaPredicted RBP10.64□□□□□ -0.71
SRP54-205ENST00000554803 AP1S2P56377 157 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 CD47Q08722 323 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 CSTF3Q12996 717 aaKnown RBP10.64□□□□□ -0.71
SRP54-205ENST00000554803 CBX3Q13185 183 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 ABRAXAS2Q15018 415 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 OXA1LQ15070 435 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 IGFBP7Q16270 282 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 TBR1Q16650 682 aa10.64□□□□□ -0.71
SRP54-205ENST00000554803 RFTN2Q52LD8 501 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms