RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ENPP7Q6UWV6 458 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 KRTCAP2Q8N6L1 136 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 ASCC1Q8N9N2 400 aaKnown RBP13.44□□□□□ -0.26
VTI1B-204ENST00000554659 MSANTD3Q96H12 275 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 IL12RB2Q99665 862 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 B4GALT6Q9UBX8 382 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 A0A0J9YVX5 310 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 TEX13DA0A0J9YY54 714 aaPredicted RBP13.44□□□□□ -0.26
VTI1B-204ENST00000554659 MAFKO60675 156 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 SLC6A9P48067 706 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 LASP1Q14847 261 aaKnown RBP13.44□□□□□ -0.26
VTI1B-204ENST00000554659 PCBP2Q15366 365 aaKnown RBP eCLIP13.44□□□□□ -0.26
VTI1B-204ENST00000554659 SPIN3Q5JUX0 258 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 COQ8AQ8NI60 647 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 SHKBP1Q8TBC3 707 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 L3HYPDHQ96EM0 354 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 MYRFLQ96LU7 910 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 HERC2P3Q9BVR0 1158 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 SERINC1Q9NRX5 453 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 GSKIPQ9P0R6 139 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 PLEKHA6Q9Y2H5 1048 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 CLCA3PQ9Y6N3 262 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 HTR1AP08908 422 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF792Q3KQV3 632 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 CMTM8Q8IZV2 173 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
VTI1B-204ENST00000554659 EBF1Q9UH73 591 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 CDC14AQ9UNH5 594 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 PADI2Q9Y2J8 665 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 LRRC37A3O60309 1634 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 STT3AP46977 705 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 OR4D2P58180 307 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 AIMP2Q13155 320 aaKnown RBP13.44□□□□□ -0.26
VTI1B-204ENST00000554659 CLCA4Q14CN2 919 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 GARNL3Q5VVW2 1013 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 CARM1Q86X55 608 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 CASTOR1Q8WTX7 329 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 FARSAQ9Y285 508 aaKnown RBP13.44□□□□□ -0.26
VTI1B-204ENST00000554659 WDR45Q9Y484 360 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 H3BSH0 61 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 SCDO00767 359 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 INHAP05111 366 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 DHRS4L1P0CG22 281 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 PIGFQ07326 219 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 NPRL3Q12980 569 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 EXOC3L2Q2M3D2 409 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 SLC27A4Q6P1M0 643 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 GATAD2BQ8WXI9 593 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 BRI3BPQ8WY22 251 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 SLC28A3Q9HAS3 691 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 POLMQ9NP87 494 aaPredicted RBP13.43□□□□□ -0.26
VTI1B-204ENST00000554659 SLC39A1Q9NY26 324 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 GGT1P19440 569 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 TIA1P31483 386 aaKnown RBP eCLIP13.43□□□□□ -0.26
VTI1B-204ENST00000554659 CDKN2DP55273 166 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 MCHR1Q99705 422 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 BCL7BQ9BQE9 202 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 HCN3Q9P1Z3 774 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 EXTL2Q9UBQ6 330 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 SH2B3Q9UQQ2 575 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 IFT52Q9Y366 437 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 PCDHGB5Q9Y5G0 923 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 A0A1B0GVC2 190 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 PPM1BO75688 479 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 ACRV1P26436 265 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 PRMT2P55345 433 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 HSD17B12Q53GQ0 312 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 ANKRD13BQ86YJ7 626 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 OR8J1Q8NGP2 316 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 FANK1Q8TC84 345 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 C11orf84Q9BUA3 381 aaPredicted RBP13.43□□□□□ -0.26
VTI1B-204ENST00000554659 TXNRD2Q9NNW7 524 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF451Q9Y4E5 1061 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 FBP2O00757 339 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 TUBG1P23258 451 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 PREPP48147 710 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 GHRHRQ02643 423 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 VTCN1Q7Z7D3 282 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 AP1S3Q96PC3 154 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 OR2B2Q9GZK3 357 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 ELOVL2Q9NXB9 296 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 DNAJC15Q9Y5T4 150 aa13.43□□□□□ -0.26
VTI1B-204ENST00000554659 CFAP20Q9Y6A4 193 aaKnown RBP13.43□□□□□ -0.26
VTI1B-204ENST00000554659 GPR89AB7ZAQ6 455 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 SLC1A7O00341 560 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 CSTBP04080 98 aaKnown RBP13.42□□□□□ -0.26
VTI1B-204ENST00000554659 GPR89BP0CG08 455 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
VTI1B-204ENST00000554659 E2F1Q01094 437 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ABRAXAS2Q15018 415 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 CELF5Q8N6W0 485 aaKnown RBP13.42□□□□□ -0.26
VTI1B-204ENST00000554659 NEIL3Q8TAT5 605 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 MGLLQ99685 303 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 FUNDC2Q9BWH2 189 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 PNO1Q9NRX1 252 aaKnown RBP13.42□□□□□ -0.26
VTI1B-204ENST00000554659 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 CA12O43570 354 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 MMP20O60882 483 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 MAP2K3P46734 347 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 SLC11A1P49279 550 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms