RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SLC39A5Q6ZMH5 540 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RNF44Q7L0R7 432 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ARMCX6Q7L4S7 300 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SLC9B2Q86UD5 537 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RASGEF1AQ8N9B8 481 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SCAIQ8N9R8 606 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LRRC75AQ8NAA5 344 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 OR6S1Q8NH40 331 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 HUS1BQ8NHY5 278 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM163Q8TC26 289 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GANCQ8TET4 914 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 C16orf78Q8WTQ4 265 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GEMIN6Q8WXD5 167 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF514Q96K75 400 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RIPOR3Q96MK2 946 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 DEPDC7Q96QD5 511 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 FAM129BQ96TA1 746 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PRSS27Q9BQR3 290 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 MARVELD1Q9BSK0 173 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CCM2Q9BSQ5 444 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 EFCAB11Q9BUY7 163 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ABCG8Q9H221 673 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SUV39H2Q9H5I1 410 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SLAMF7Q9NQ25 335 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 IL20Q9NYY1 176 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TRPM5Q9NZQ8 1165 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 USP36Q9P275 1121 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CLEC4EQ9ULY5 219 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SH2B3Q9UQQ2 575 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 INVSQ9Y283 1065 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TPRKBQ9Y3C4 175 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 POLR3HQ9Y535 204 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 A0A1W2PQ72 361 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 BTN3A1O00481 513 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 OGG1O15527 345 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CLEC3AO75596 197 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PRAMEF1O95521 474 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SERPINA1P01009 418 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 MT-ND2P03891 347 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RHOCP08134 193 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 OSMP13725 252 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 POU3F3P20264 500 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 FMO4P31512 558 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 AKT1P31749 480 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NUDT1P36639 197 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CASP3P42574 277 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ABCG1P45844 678 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HTR3AP46098 478 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 KIAA1024LP59773 190 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 OLR1P78380 273 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SP4Q02446 784 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 BAMBIQ13145 260 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CAMK2GQ13555 558 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM44Q2T9K0 475 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CTXN3Q4LDR2 81 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ATP13A5Q4VNC0 1218 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM35AQ53FP2 167 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ZRANB3Q5FWF4 1079 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CEP78Q5JTW2 689 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RNF219Q5W0B1 726 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ANKRD34AQ69YU3 496 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 FAM166AQ6J272 317 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 TTC33Q6PID6 262 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NXPE4Q6UWF7 544 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RASSF6Q6ZTQ3 369 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NCCRP1Q6ZVX7 275 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PTAR1Q7Z6K3 402 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PHC2Q8IXK0 858 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 KRTCAP2Q8N6L1 136 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NETO2Q8NC67 525 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HIPK4Q8NE63 616 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NDNFQ8TB73 568 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 KCTD12Q96CX2 325 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PABPC5Q96DU9 382 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 THAP11Q96EK4 314 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RBM18Q96H35 190 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PKP4Q99569 1192 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 APOL2Q9BQE5 337 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PINK1Q9BXM7 581 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NIPAL2Q9H841 368 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HEXA-AS1Q9H8Q6 139 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SLC24A3Q9HC58 644 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ITM2CQ9NQX7 267 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 KCMF1Q9P0J7 381 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ERVK-18Q9QC07 812 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CPA4Q9UI42 421 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RAB23Q9ULC3 237 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PCDHGB7Q9Y5F8 929 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HEATR5BQ9P2D3 2071 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 TRAV1-2A0A0B4J238 106 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 FITM1A5D6W6 292 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LINC00862A6NCI5 91 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NPIPB13A6NJU9 1138 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 UPK3BL1B0FP48 263 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NPIPB4C9JG80 1138 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 UPK3BL2E5RIL1 263 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 H3BM21 787 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 AKAP8O43823 692 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LZTS3O60299 673 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 B3GAT3O94766 335 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms