RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TMEM79Q9BSE2 394 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 EDEM2Q9BV94 578 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 TRIM54Q9BYV2 358 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 TWSG1Q9GZX9 223 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 XKR8Q9H6D3 395 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 KIR3DX1Q9H7L2 352 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 CNOT10Q9H9A5 744 aaKnown RBP6.05□□□□□ -1.44
SCFD1-212ENST00000554486 UCK1Q9HA47 277 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 POT1Q9NUX5 634 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 ARL15Q9NXU5 204 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 NKIRAS1Q9NYS0 192 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 NCKIPSDQ9NZQ3 722 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 CD274Q9NZQ7 290 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 POLG2Q9UHN1 485 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 MID2Q9UJV3 735 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 ICKQ9UPZ9 632 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 POLHQ9Y253 713 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 BTBD3Q9Y2F9 522 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 TDRKHQ9Y2W6 561 aaKnown RBP6.05□□□□□ -1.44
SCFD1-212ENST00000554486 PCDHGB2Q9Y5G2 931 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 COLEC10Q9Y6Z7 277 aa6.05□□□□□ -1.44
SCFD1-212ENST00000554486 COL5A1P20908 1838 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 MDC1Q14676 2089 aaKnown RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 A0A088AWK7 358 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 A0A1W2PPV9 198 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 WDR91A4D1P6 747 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 LILRA5A6NI73 299 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 E7ENX8 843 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 STX16-NPEPL1H3BU86 382 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 STX16O14662 325 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 BIRC5O15392 142 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 IPO13O94829 963 aaKnown RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 CD1AP06126 327 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 RPS17P08708 135 aaKnown RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ANXA5P08758 320 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 HIST1H2AGP0C0S8 130 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ALPPL2P10696 532 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 FGF3P11487 239 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 CD59P13987 128 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 HIST1H2ADP20671 130 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 EEF1DP29692 281 aaKnown RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 PEBP1P30086 187 aaKnown RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 GNALP38405 381 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 GDF5P43026 501 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 SLC6A12P48065 614 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 HSPA7P48741 367 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 HNMTP50135 292 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 RAB28P51157 221 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ATXN3P54252 364 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 PNLIPRP1P54315 467 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 NAGLUP54802 743 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 RAP2BP61225 183 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 HERVK_113P63132 956 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 TAP2Q03519 686 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 NAE1Q13564 534 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ARHGAP19Q14CB8 494 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 PTCHD3Q3KNS1 767 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 UNC50Q53HI1 259 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 SPDYAQ5MJ70 313 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ZNF678Q5SXM1 525 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 THEMIS2Q5TEJ8 643 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 LIPMQ5VYY2 423 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 GUSBP11Q6P575 273 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 TTC23LQ6PF05 361 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 AGTRAPQ6RW13 159 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ZCCHC23Q6ZST2 131 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 TMEM26Q6ZUK4 368 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 USP51Q70EK9 711 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 RPS27LQ71UM5 84 aaKnown RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 PPP1R3BQ86XI6 285 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 NUDCD3Q8IVD9 361 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 SLC22A9Q8IVM8 553 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 TCAIMQ8N3R3 496 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 C2orf73Q8N5S3 287 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 AVL9Q8NBF6 648 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 PPFIBP2Q8ND30 876 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 OR4E2Q8NGC2 313 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 OR2L8Q8NGY9 312 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 FAM76AQ8TAV0 307 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ZFPM2Q8WW38 1151 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 LCN9Q8WX39 176 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ATL1Q8WXF7 558 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 TFAP2CQ92754 450 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ESAMQ96AP7 390 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 PYCR2Q96C36 320 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 CCDC126Q96EE4 140 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 L3HYPDHQ96EM0 354 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 APOLD1Q96LR9 279 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 OR4K3Q96R72 315 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 EGFL8Q99944 293 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 PAIP2Q9BPZ3 127 aaKnown RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 H2AFJQ9BTM1 129 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 C1orf43Q9BWL3 253 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 GATA5Q9BWX5 397 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 TBC1D10AQ9BXI6 508 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ERVK-6Q9BXR3 956 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 ATG10Q9H0Y0 220 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 TMEM9BQ9NQ34 198 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 INTS9Q9NV88 658 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms