RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ANP32EQ9BTT0 268 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 IL22Q9GZX6 179 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 PCBD2Q9H0N5 130 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 SLC6A15Q9H2J7 730 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 KLHL31Q9H511 634 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 EIF2B3Q9NR50 452 aaKnown RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 ADAMTS6Q9UKP5 1117 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 PDE10AQ9Y233 779 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 GRID2IPA4D2P6 1211 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 MBD3L3A6NE82 208 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-208ENST00000553846 RNF212BA8MTL3 300 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 SYF2O95926 243 aaKnown RBP8.34□□□□□ -1.07
PRKCH-208ENST00000553846 IL18BPO95998 194 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 APRTP07741 180 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 ENO3P13929 434 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-208ENST00000553846 ETS1P14921 441 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 PAX1P15863 534 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 CHRM3P20309 590 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 OPRM1P35372 400 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 PIGAP37287 484 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 TBX2Q13207 712 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-208ENST00000553846 BBS9Q3SYG4 887 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 NSUN5P2Q63ZY6 315 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 KIAA0930Q6ICG6 404 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-208ENST00000553846 MRNIPQ6NTE8 343 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 AGTRAPQ6RW13 159 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 CES3Q6UWW8 571 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 P3H2Q8IVL5 708 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 VSTM4Q8IW00 320 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 OR8K3Q8NH51 312 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 MBD3L2Q8NHZ7 208 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-208ENST00000553846 PAQR8Q8TEZ7 354 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 PTPMT1Q8WUK0 201 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-208ENST00000553846 NTNG2Q96CW9 530 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 GSX2Q9BZM3 304 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 PRDM14Q9GZV8 571 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 ADAP2Q9NPF8 381 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 RAB6BQ9NRW1 208 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 SACM1LQ9NTJ5 587 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 QPCTLQ9NXS2 382 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 ZFP69BQ9UJL9 534 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 DHRS7Q9Y394 339 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 TESMINQ9Y4I5 508 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 PCDHA13Q9Y5I0 950 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 NINQ8N4C6 2090 aa8.34□□□□□ -1.07
PRKCH-208ENST00000553846 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.34□□□□□ -1.08
PRKCH-208ENST00000553846 MED12LQ86YW9 2145 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 SH3D21A4FU49 640 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 CD8B2A6NJW9 211 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 AHRRA9YTQ3 701 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 EIF3FO00303 357 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 OR1F1O43749 312 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 LIASO43766 372 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 ZBTB14O43829 449 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 SMPD2O60906 423 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 TBX6O95947 436 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 STIP1P31948 543 aaKnown RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 SOX18P35713 384 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 AHRP35869 848 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 CCR8P51685 355 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 HSD17B7P56937 341 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 SESN2P58004 480 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 RAB8AP61006 207 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 SKP1P63208 163 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 REEP5Q00765 189 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 CBLBQ13191 982 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 CTBP1Q13363 440 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 NAE1Q13564 534 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 RUNX2Q13950 521 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 ELAVL1Q15717 326 aaKnown RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 PHKG1Q16816 387 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 CATSPEREQ5SY80 951 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 DCST1Q5T197 706 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 HSDL2Q6YN16 418 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 FAM47EQ6ZV65 393 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 UBE2R2Q712K3 238 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 ABHD13Q7L211 337 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 HEATR5AQ86XA9 2040 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 CPNE9Q8IYJ1 553 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 OR56A3Q8NH54 315 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 PIGTQ969N2 578 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 LRRC46Q96FV0 321 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 TIMP4Q99727 224 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 YIPF4Q9BSR8 244 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 UBQLN3Q9H347 655 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 ZFP64Q9NPA5 681 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 PNO1Q9NRX1 252 aaKnown RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 INTS10Q9NVR2 710 aaKnown RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 SYBUQ9NX95 663 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 ALKBH4Q9NXW9 302 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 GALNT8Q9NY28 637 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 SOX13Q9UN79 622 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 REXO2Q9Y3B8 237 aaKnown RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 CHCHD2Q9Y6H1 151 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.33□□□□□ -1.08
PRKCH-208ENST00000553846 EXPH5Q8NEV8 1989 aa8.33□□□□□ -1.08
PRKCH-208ENST00000553846 TENM1Q9UKZ4 2725 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 BTNL10A8MVZ5 291 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 CYR61O00622 381 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 CNOT4O95628 575 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms