RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 DYDC1Q8WWB3 177 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 C19orf60Q96EN9 201 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 NAF1Q96HR8 494 aaKnown RBP14□□□□□ -0.17
MTHFD1-204ENST00000553405 SLC45A3Q96JT2 553 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 FAR2Q96K12 515 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 OR1F2PQ96R84 312 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 CCT7Q99832 543 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 MESP1Q9BRJ9 268 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 ACTL8Q9H568 366 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 MEAF6Q9HAF1 191 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 ZNF282Q9UDV7 671 aaPredicted RBP14□□□□□ -0.17
MTHFD1-204ENST00000553405 TCFL5Q9UL49 500 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 FARSAQ9Y285 508 aaKnown RBP14□□□□□ -0.17
MTHFD1-204ENST00000553405 DLGAP4Q9Y2H0 992 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 ATG4BQ9Y4P1 393 aa14□□□□□ -0.17
MTHFD1-204ENST00000553405 A0A088AWK7 358 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 A0A1W2PR48 441 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 OR2W5A6NFC9 320 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 C9J4A7 227 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 FAM227AF5H4B4 570 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 TGFBR3LH3BV60 316 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 HDAC3O15379 428 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 CHEK2O96017 543 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 GBAP04062 536 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 KLK1P06870 262 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 FHP07954 510 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 PIM1P11309 404 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 RNH1P13489 461 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 ZNF10P21506 573 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 TIA1P31483 386 aaKnown RBP eCLIP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 RAB38P57729 211 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 RHAGQ02094 409 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 KLC1Q07866 573 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 SLAMF1Q13291 335 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 IL10RAQ13651 578 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 ERV3-1Q14264 604 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 RFTN2Q52LD8 501 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 SPIN4Q56A73 249 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 DDIASQ8IXT1 998 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 KIRREL3Q8IZU9 778 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 PIWIL2Q8TC59 973 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 TBC1D20Q96BZ9 403 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 PEX11GQ96HA9 241 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 MAELQ96JY0 434 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 CENPKQ9BS16 269 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 NUF2Q9BZD4 464 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 GPN2Q9H9Y4 310 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 LRTM1Q9HBL6 345 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 C14orf105Q9NVL8 296 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 NMRK1Q9NWW6 199 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 C1orf109Q9NX04 203 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 MARCOQ9UEW3 520 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 MCM8Q9UJA3 840 aa13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 NXT1Q9UKK6 140 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-204ENST00000553405 IGKV3D-11A0A0A0MRZ8 115 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 A0A1W2PQ72 361 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 KLK10O43240 276 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 PROM1O43490 865 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 RGS14O43566 566 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 EDF1O60869 148 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 FAM58BPP0C7Q3 252 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 IL10P22301 178 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 ITPKBP27987 946 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 ACSM2AQ08AH3 577 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 C6orf136Q5SQH8 315 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 VWA5B1Q5TIE3 1220 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 ACSM2BQ68CK6 577 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 CGB2Q6NT52 195 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 FAM47EQ6ZV65 393 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 LARP4Q71RC2 724 aaKnown RBP eCLIP13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 CLNKQ7Z7G1 428 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 SCUBE1Q8IWY4 988 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 UCN3Q969E3 161 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 MIEF2Q96C03 454 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 TM4SF18Q96CE8 201 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 ZNF317Q96PQ6 595 aaPredicted RBP13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 RBCK1Q9BYM8 510 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 VN1R1Q9GZP7 353 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 SOX17Q9H6I2 414 aaPredicted RBP13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 COPS7BQ9H9Q2 264 aaPredicted RBP13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 LYARQ9NX58 379 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 TEX10Q9NXF1 929 aaPredicted RBP13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 AHSPQ9NZD4 102 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 KCND3Q9UK17 655 aa13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 EXO1Q9UQ84 846 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-204ENST00000553405 CACNA1GO43497 2377 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 SCN2AQ99250 2005 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 TCP11X1B4DZS4 312 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 PCDH7O60245 1069 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 PRKRAO75569 313 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 CREG1O75629 220 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 FURINP09958 794 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 ACPPP15309 386 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 TACR1P25103 407 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 GYS2P54840 703 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 TNFRSF17Q02223 184 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 OCA2Q04671 838 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms