RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 MTERF1Q99551 399 aaKnown RBP14.39□□□□□ -0.11
SHMT2-204ENST00000553324 SLC29A3Q9BZD2 475 aa14.39□□□□□ -0.11
SHMT2-204ENST00000553324 OR51B5Q9H339 312 aa14.39□□□□□ -0.11
SHMT2-204ENST00000553324 DMRT3Q9NQL9 472 aa14.39□□□□□ -0.11
SHMT2-204ENST00000553324 NECTIN3Q9NQS3 549 aa14.39□□□□□ -0.11
SHMT2-204ENST00000553324 TMEM216Q9P0N5 145 aa14.39□□□□□ -0.11
SHMT2-204ENST00000553324 RNF11Q9Y3C5 154 aa14.39□□□□□ -0.11
SHMT2-204ENST00000553324 COPG1Q9Y678 874 aaKnown RBP14.39□□□□□ -0.11
SHMT2-204ENST00000553324 TRAV17A0A0B4J275 112 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 A8MT66 165 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 CDH16O75309 829 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 CELA2AP08217 269 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 RPS17P08708 135 aaKnown RBP14.38□□□□□ -0.11
SHMT2-204ENST00000553324 KRT15P19012 456 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 ATP5F1P24539 256 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-204ENST00000553324 CERS1P27544 350 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 TLX1P31314 330 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-204ENST00000553324 HERVK_113P63132 956 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 IFT88Q13099 833 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 SERTAD2Q14140 314 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 ZRSR2Q15696 482 aaKnown RBP14.38□□□□□ -0.11
SHMT2-204ENST00000553324 GGTA1PQ4G0N0 100 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 FRG2Q64ET8 278 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-204ENST00000553324 CUZD1Q86UP6 607 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 SCUBE1Q8IWY4 988 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 LGI4Q8N135 537 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 WDR20Q8TBZ3 569 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 ELP5Q8TE02 316 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 CNDP1Q96KN2 507 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 FRG2BQ96QU4 278 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 SERPINI1Q99574 410 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 ERVK-6Q9BXR3 956 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHMT2-204ENST00000553324 AGPAT4Q9NRZ5 378 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 AHSPQ9NZD4 102 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 KCMF1Q9P0J7 381 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 MAP10Q9P2G4 905 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 PLAAQ9Y263 795 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 PCDHGA10Q9Y5H3 936 aa14.38□□□□□ -0.11
SHMT2-204ENST00000553324 GCN1Q92616 2671 aaKnown RBP14.37□□□□□ -0.11
SHMT2-204ENST00000553324 SAGE2PA6NJ88 616 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 ESPNB1AK53 854 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 PYCARD-AS1I3L0S3 204 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 GOLGA8RI6L899 631 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 MLYCDO95822 493 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 SHBGP04278 402 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 SBK3P0C264 359 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 IMPDH1P20839 514 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 TNFSF10P50591 281 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 NAA20P61599 178 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 RPS13P62277 151 aaKnown RBP14.37□□□□□ -0.11
SHMT2-204ENST00000553324 ZNF33BQ06732 778 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 STX4Q12846 297 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 ACER2Q5QJU3 275 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 WDR93Q6P2C0 686 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 EMBQ6PCB8 327 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 ZNF793Q6ZN11 406 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 TMEM132CQ8N3T6 1108 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 ZCCHC7Q8N3Z6 543 aaKnown RBP14.37□□□□□ -0.11
SHMT2-204ENST00000553324 CISD2Q8N5K1 135 aaKnown RBP14.37□□□□□ -0.11
SHMT2-204ENST00000553324 FAM47BQ8NA70 645 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 OR52B6Q8NGF0 335 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 OR1N1Q8NGS0 311 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 ZNF483Q8TF39 744 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-204ENST00000553324 MZB1Q8WU39 189 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 SNRNP40Q96DI7 357 aaKnown RBP14.37□□□□□ -0.11
SHMT2-204ENST00000553324 ELOVL6Q9H5J4 265 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 ZBTB26Q9HCK0 441 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 SEMA4BQ9NPR2 832 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-204ENST00000553324 NMRK1Q9NWW6 199 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 LUZP4Q9P127 313 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 PHF11Q9UIL8 331 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 GRID1Q9ULK0 1009 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 SNX6Q9UNH7 406 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 STK38LQ9Y2H1 464 aa14.37□□□□□ -0.11
SHMT2-204ENST00000553324 BAHCC1Q9P281 2608 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 OR5H15A6NDH6 313 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 SAP18O00422 153 aaKnown RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 RTCAO00442 366 aaKnown RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 PLPP1O14494 284 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 GLRA3O75311 464 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 SH3BGRLO75368 114 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 SUPT7LO94864 414 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 SEMA3DO95025 777 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 WDPCPO95876 746 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 CPN2P22792 545 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 PPP2R1BP30154 601 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 HSD17B3P37058 310 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 CLCN2P51788 898 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 PRKAA2P54646 552 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 CLCQ05315 142 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 CCDC153Q494R4 210 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 ZNF678Q5SXM1 525 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 GPR180Q86V85 440 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 RIBC1Q8N443 379 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 HORMAD2Q8N7B1 307 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 CATSPER1Q8NEC5 780 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 B3GNT7Q8NFL0 401 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms