RNA–Protein interactions for RNA: ENST00000552997.1

USP15-219, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 4

Gene USP15, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-219ENST00000552997 PANX3Q96QZ0 392 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 PRMT1Q99873 361 aaKnown RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 FAM213AQ9BRX8 229 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 OSBPL8Q9BZF1 889 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 TRIM7Q9C029 511 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 SHARPINQ9H0F6 387 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 DDX47Q9H0S4 455 aaKnown RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 C1orf21Q9H246 121 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 RIMS4Q9H426 269 aaPredicted RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 CUEDC2Q9H467 287 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 RPF1Q9H9Y2 349 aaKnown RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 RAVER2Q9HCJ3 691 aaKnown RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 FAM207AQ9NSI2 230 aaPredicted RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 DNAJC11Q9NVH1 559 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 ANO10Q9NW15 660 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 HPF1Q9NWY4 346 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.4□□□□□ -2.03
USP15-219ENST00000552997 EPS15L1Q9UBC2 864 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 NOCTQ9UK39 431 aaKnown RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 RUVBL2Q9Y230 463 aaKnown RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 FOXA2Q9Y261 457 aaPredicted RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 ZNF510Q9Y2H8 683 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 TDRKHQ9Y2W6 561 aaKnown RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 HBS1LQ9Y450 684 aaKnown RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 MTF2Q9Y483 593 aaPredicted RBP2.4□□□□□ -2.03
USP15-219ENST00000552997 KIAA1217Q5T5P2 1943 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 NPHP3Q7Z494 1330 aa2.4□□□□□ -2.03
USP15-219ENST00000552997 ABCA7Q8IZY2 2146 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 CROCCQ5TZA2 2017 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 ATRXP46100 2492 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 MAGEB16A2A368 324 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 KRT87PA6NCN2 255 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 ARHGAP42A6NI28 874 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 NDC80O14777 642 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 CPLX1O14810 134 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 VEGFDO43915 354 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 GRAP2O75791 330 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 LETM1O95202 739 aaPredicted RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 BAG3O95817 575 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 SBK2P0C263 348 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 SP9P0CG40 484 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 SLC2A2P11168 524 aaPredicted RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 F3P13726 295 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 GAP43P17677 238 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 CYP3A5P20815 502 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 MARCKSP29966 332 aaPredicted RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 KIF5BP33176 963 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 DUTP33316 252 aaKnown RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 SERPINB6P35237 376 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 ASMTP46597 345 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 NUMBP49757 651 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 CLCN4P51793 760 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 SLC12A3P55017 1021 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 NME5P56597 212 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 BPIFB3P59826 476 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 RPP38P78345 283 aaKnown RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 IRX4P78413 519 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 MYL7Q01449 175 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 GFPT1Q06210 699 aaPredicted RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 PPP1R8Q12972 351 aaKnown RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 PDE7AQ13946 482 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 SQLEQ14534 574 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 HERC3Q15034 1050 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 PPA1Q15181 289 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 TPD52L1Q16890 204 aaPredicted RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 GPR33Q49SQ1 333 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 XKR3Q5GH77 459 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 FAM46CQ5VWP2 391 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 CTR9Q6PD62 1173 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 CATSPER4Q7RTX7 472 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 ZNF410Q86VK4 478 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 LAX1Q8IWV1 398 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 AQP12AQ8IXF9 295 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 PHC2Q8IXK0 858 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 BATF2Q8N1L9 274 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 HDDC3Q8N4P3 179 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 MRPL43Q8N983 215 aaKnown RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 OR13C3Q8NGS6 347 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 C11orf45Q8TAV5 145 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 PIK3R3Q92569 461 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 TOMM40LQ969M1 308 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 EPSTI1Q96J88 318 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 C4orf45Q96LM5 186 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 PRAM1Q96QH2 718 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 LGMNQ99538 433 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 OVOL2Q9BRP0 275 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 TEX13AQ9BXU3 409 aaPredicted RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 NACA2Q9H009 215 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 TMEM245Q9H330 911 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 RWDD1Q9H446 243 aaPredicted RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 ABCB10Q9NRK6 738 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 EXOC1Q9NV70 894 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 PRO0461Q9UI25 63 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 TEKT2Q9UIF3 430 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 FBXL4Q9UKA2 621 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 ELF5Q9UKW6 265 aaPredicted RBP2.39□□□□□ -2.03
USP15-219ENST00000552997 CCPG1Q9ULG6 757 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 TNNQ9UQP3 1299 aa2.39□□□□□ -2.03
USP15-219ENST00000552997 A0A0A6YYC8 382 aaPredicted RBP2.38□□□□□ -2.03
USP15-219ENST00000552997 TMEM129A0AVI4 362 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms